Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_1784 |
Symbol | |
ID | 5747342 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 1984048 |
End bp | 1984620 |
Gene Length | 573 bp |
Protein Length | 190 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641296864 |
Product | MarR family transcriptional regulator |
Protein accession | YP_001562811 |
Protein GI | 160897229 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.674772 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCCGC GCAAGACCGC TGCCGCACCG GCCCCCGCAT CCACCCCCCT CGCCAACGCC CCCGAAGCGC TGCGCCCGCA CCTGGCCCTG ATGGCCGAGA CCGCGCAGCC CGGCACCGAC ACGCCGGCCG CCGGTCTGGG CCTGCTGCTG CTGTGGCTGG CCGACGATGT GGAGCAGCGC GCCAACGCAT CGCTGCAGGC GTTCGGCCTG TCCGAGAGCA AGCTCGACGT GCTCATGATC TTCGGCCTGG CCGAGCGCGG GCTGCTGGGC GACACGGTGG TCACGCCGTC CTATATCGCC AGCTACGTCG GCGTGACGCG CTCGTCGGTG ACGGGCCTGC TGGACTGGCT GGAAAAGCGC TCGCTGCTGG CGCGCAGCCT CAGCCAGGAA GACCGCCGCA GCTTCGACCT GGCGCTCACC GACCAGGGCC GCGAGGTGCT GGCCCGCGCG CTGCCGGCCT TCTGGCGCAT GTGCGAGTCC CTGGTCGACT ACCTGGACGA GGGCGAGCGT GCCAGCCTGC AGTCCATCCT CTTCAAGGCC TGGACGAGGA TGAAGGCGCA AGAGGGCGCT TGA
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Protein sequence | MSPRKTAAAP APASTPLANA PEALRPHLAL MAETAQPGTD TPAAGLGLLL LWLADDVEQR ANASLQAFGL SESKLDVLMI FGLAERGLLG DTVVTPSYIA SYVGVTRSSV TGLLDWLEKR SLLARSLSQE DRRSFDLALT DQGREVLARA LPAFWRMCES LVDYLDEGER ASLQSILFKA WTRMKAQEGA
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