Gene Daci_1784 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1784 
Symbol 
ID5747342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1984048 
End bp1984620 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content71% 
IMG OID641296864 
ProductMarR family transcriptional regulator 
Protein accessionYP_001562811 
Protein GI160897229 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.674772 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCCGC GCAAGACCGC TGCCGCACCG GCCCCCGCAT CCACCCCCCT CGCCAACGCC 
CCCGAAGCGC TGCGCCCGCA CCTGGCCCTG ATGGCCGAGA CCGCGCAGCC CGGCACCGAC
ACGCCGGCCG CCGGTCTGGG CCTGCTGCTG CTGTGGCTGG CCGACGATGT GGAGCAGCGC
GCCAACGCAT CGCTGCAGGC GTTCGGCCTG TCCGAGAGCA AGCTCGACGT GCTCATGATC
TTCGGCCTGG CCGAGCGCGG GCTGCTGGGC GACACGGTGG TCACGCCGTC CTATATCGCC
AGCTACGTCG GCGTGACGCG CTCGTCGGTG ACGGGCCTGC TGGACTGGCT GGAAAAGCGC
TCGCTGCTGG CGCGCAGCCT CAGCCAGGAA GACCGCCGCA GCTTCGACCT GGCGCTCACC
GACCAGGGCC GCGAGGTGCT GGCCCGCGCG CTGCCGGCCT TCTGGCGCAT GTGCGAGTCC
CTGGTCGACT ACCTGGACGA GGGCGAGCGT GCCAGCCTGC AGTCCATCCT CTTCAAGGCC
TGGACGAGGA TGAAGGCGCA AGAGGGCGCT TGA
 
Protein sequence
MSPRKTAAAP APASTPLANA PEALRPHLAL MAETAQPGTD TPAAGLGLLL LWLADDVEQR 
ANASLQAFGL SESKLDVLMI FGLAERGLLG DTVVTPSYIA SYVGVTRSSV TGLLDWLEKR
SLLARSLSQE DRRSFDLALT DQGREVLARA LPAFWRMCES LVDYLDEGER ASLQSILFKA
WTRMKAQEGA