Gene Daci_1751 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1751 
Symbol 
ID5747309 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1944652 
End bp1946502 
Gene Length1851 bp 
Protein Length616 aa 
Translation table11 
GC content55% 
IMG OID641296831 
ProductAYP/GTP-binding protein 
Protein accessionYP_001562778 
Protein GI160897196 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.722417 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCAACA TTCAGATATC GAACATTCTC CTTTGGCAGA AAGACCAGCA GTTCAGAAAT 
CTGGAATTTC GACACAACCA CGTCAACGTA ATTACCGGTG ATGCGGGCAA GGGAAAATCG
TCCATCCTGT TCATCATCGA TTATTGCCTG CTGGCCAGTG AAACCAAGGG TATATCCAAG
ACCAATATCG ATTCCAAGGT CGACTGGTAT GGCATCAGGC TTACCATCGA CGGCAAGGAA
CTGGTCATCG CCCGCCCTTC GGAGGCGCAA CAGGACAGAG ATCGCGCCTA CTTCAGTGAG
GATGGAATCA TCCCAGAGCG GCCGACACCG AATATCCGTA TCGATAACCT CAAGCGGGTC
CTCAACAAGG CTTTCGGGAT CGATCCCGAG TTGAAGGTTC CTTACGGCGG CAAGTTCATA
CAGGCTGGTC AGAAGGTCTC GTTTCGCAAC TTCCTGGCGC ATTGTTATCA GGATCAGACG
ACCATCATCG CCCCAGATTA TCTGTACATT CGTCCAAGTG ATGGCCGATA CCAGGAAGGG
ATCGAACGGA CTTTTCGCAT GGCCATCGGT GCAGAGAACG TCAAGACAGC GCTCGCGCGC
AGTCAACTGG CTGACCTCGA ACGCAAGAAG GCCGCGCAAG CGAGAAAGCA GGGGATTTAT
GACAAGGCGG TCCACGCGTT CTCCGACGAG CTTGAGCAGC TCGGCCGGGA AGCCATGTCT
TTTGGCCTAG TCGACAACTT CCCGGATACG CCTACGGAAC AGATCAATGC ACTCCGGCTA
GCGCTCGACA TGGCCGATAT CTTGCCAGCA CAACTCTATG AAGAAGATCG AATTGAGGCC
GAGATTTTTG AGCTACGCAC GAAGAACCGC CGGTTGGTGG CTTTCGTCGA AAACGGAGAC
CACCATAAAG GTGCGCTCCG GAACATGGCC GATGCGCTTA AACCGGCCAG CATATTCGAC
GCCGATTTAG AGCAGGTGTT TCCGTCGTTC CTGGCCCATC AGGTGGTTTC GCGCCTTCAG
AGGGAACTGA ACGATATTCA GCGAACTATC CGCAGCCGCG ACACCTTCCC CTTTCTCAAG
GAGGTGCAAA CGCTGATCGA TGATAACGAA AGGCGCATCG TCGATCTACG TGCTAGACAG
GCGGAATTAC AGCAAAGTCA GGCGATGCGC CGGAGTCCGC AGACCTACCA TCGGTATCTT
GGCCGGCTCG AGTCGAAGCT TGAGCTCTAC GCCAGACGCG ACGACTTGCG CCAACCAGTT
ATCAACGACG ACCTCGATGC GCCGATCCGA GAACTGCAGG AAGCAGTCGA CGCTAACCTG
CAGAAGACTG CCCACACCAA GGAAGAACTC AACCGACGCA TCAACGCACG TTTGACGCGG
CTGAAACTCA AGGGTTACGA GGGCTTTTTC GCGCATCTTG CCGAGCGGGA ACGCCTGATC
ACCCTGTACT CCCCGGATCT CTCGCAGACA GAGAAAATGC CGGACATTGG CAGTGCGTCG
AACTACCTCT ACCTACATGT CGCCTATTTT CTTGCACTGC ACGAGATCGC CAAGCTTCAG
CGCGTACCCT GGATGCCATC GTTCTTGGTG CTGGACCAAC CCAGTACGCC GTATTGGACC
GACGGAAAGC CGACCGACGA TATCGTCAGC CTTGACGTCG TGCTAAGCGA ACTCAACGGC
TTCGTCAAGG AAATGGACGC GCATGGAGGC TTTCAAATCA TCGTGCTGGA ACATATCGAA
GAGACTCATT GGACAGGCCT GGGGTTGGAA CGATTCCACC TAGTTGATCG TGAACTGCGC
GAGGATTATG GATTGATCCT ACGCAGACCC GCCTCTCCAG CGAAGGAATA G
 
Protein sequence
MSNIQISNIL LWQKDQQFRN LEFRHNHVNV ITGDAGKGKS SILFIIDYCL LASETKGISK 
TNIDSKVDWY GIRLTIDGKE LVIARPSEAQ QDRDRAYFSE DGIIPERPTP NIRIDNLKRV
LNKAFGIDPE LKVPYGGKFI QAGQKVSFRN FLAHCYQDQT TIIAPDYLYI RPSDGRYQEG
IERTFRMAIG AENVKTALAR SQLADLERKK AAQARKQGIY DKAVHAFSDE LEQLGREAMS
FGLVDNFPDT PTEQINALRL ALDMADILPA QLYEEDRIEA EIFELRTKNR RLVAFVENGD
HHKGALRNMA DALKPASIFD ADLEQVFPSF LAHQVVSRLQ RELNDIQRTI RSRDTFPFLK
EVQTLIDDNE RRIVDLRARQ AELQQSQAMR RSPQTYHRYL GRLESKLELY ARRDDLRQPV
INDDLDAPIR ELQEAVDANL QKTAHTKEEL NRRINARLTR LKLKGYEGFF AHLAERERLI
TLYSPDLSQT EKMPDIGSAS NYLYLHVAYF LALHEIAKLQ RVPWMPSFLV LDQPSTPYWT
DGKPTDDIVS LDVVLSELNG FVKEMDAHGG FQIIVLEHIE ETHWTGLGLE RFHLVDRELR
EDYGLILRRP ASPAKE