Gene Daci_1707 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1707 
Symbol 
ID5747265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1898981 
End bp1899466 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content46% 
IMG OID641296788 
Producthypothetical protein 
Protein accessionYP_001562735 
Protein GI160897153 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.672296 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.226916 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCTG AACACAATCA AACACATGCA GACAAAGAAA TGTCTGAAAT AAACAACGAT 
GGAGATTTGA CAGATCTACT TGGAGAACTC CGCATTCTAC TTCCTAGCTC ACAGCTACTG
TCCGCATTTT TGATAACAGT ACCTTTCATG CCAAGATTCG ATGCAATCGC TTACACGGAA
AAATGGGTAT TCTTGGCGAC ATTCCTCTTG GCAGTGATGA GCTTGATACT ACTAAGTGCA
ACCGCCGTCC AGCATCGACT AATTCGACCG CTGATTGACA GACCTCGCTT CAAAACATTT
GCATCTCGTC AGATTCTGGC GGGCGCGGTA ACGCTTGCTA TCGCGCTGAT ATCAGGCACA
CAACTTGTTC TTTCAACCAT ATTTGGTCAT TTCGTGGGCA GCATAGCTGC GGCGTTGATC
GCTGTTTTGA TTCTTACGAC ATGGTGGTGG TTACCGCGTC ACTGGAAAGA GGCTGGAAGA
TTATGA
 
Protein sequence
MKSEHNQTHA DKEMSEINND GDLTDLLGEL RILLPSSQLL SAFLITVPFM PRFDAIAYTE 
KWVFLATFLL AVMSLILLSA TAVQHRLIRP LIDRPRFKTF ASRQILAGAV TLAIALISGT
QLVLSTIFGH FVGSIAAALI AVLILTTWWW LPRHWKEAGR L