| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1658 |
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| Symbol | |
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| ID | 5747216 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 1850769 |
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| End bp | 1852691 |
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| Gene Length | 1923 bp |
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| Protein Length | 640 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641296739 |
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| Product | surface antigen (D15) |
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| Protein accession | YP_001562686 |
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| Protein GI | 160897104 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0729] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.586851 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAAGC TCCCCCCCGC AACAGCGCCG GCCCGAGGGC CGGCGTTTTT GTTTCTGTTG
AGTGCAGCCC TGATGCTCGG TGGCTGCAGC CTCCTGCCGT CCAAGAATGA TGACAAGGAC
ACGGACCCGT CGCTGATTGC AGCGACCGGC GACCCGGCCT TCTCGCTCGT CGTCGATGCG
CCCAAGGAAG TGCGCGAACT GCTGGAAAAG CACCTCGAAC TGCGCCGCTA CCGCTACCAG
AGCGATCTGC AGCGGCGCGA GCTCACGCGG CTGCTGGGCG CCACCGACGC CAACGTGCGC
GACCTGATCG GCACGCTGGG CTACTTCAGC CCCACGGTCA CGGTGGAGAT CAAGGAAACG
CCCGAATCCG AAGAGGCCCC GCTGGAGGTC ACCGTCAAGG TGGACCCGGG CGAGCCCGCC
ACCATTGCGC GCAGCCAGGT GCGCTTTGCG GGCGTCAACG CCGACGATCC CGATGGCGCC
TCCCAGCGCG CCACCATCGA AGAGGACTGG CCGCTGCAGC CCGGCCAGCG CTTCAGCCAG
TCCAGCTGGA GCCAGGCCAA GAGCCAGGGC CTGCGCACGC TGCAGTCGCG CCGCTACCCG
CTGGCGCGCA TCGACTCCAG CCTGGCCGAC ATCGACGCCG ACACGCATGA GGCCGATGTC
AGCGTGGCCT ATGCGCCCGG CCCGGCCTAC ACCTTCGGCC CGCTGCGCAT CGAAGGCGCC
CAGCGCTACG ACCCCGTGGG CACGGCCCGC ATCGCACGCC TGCCCGAGGG CGAGGAATAC
GACCAGACCG CCCTGGTCGA CGCCCAACTG CGCCTGGCCA GCAGCGGCTA CTACGACTCC
GTCTTCCTCA CGCTGGCCAA CGTACCCCAG CAGGGAGAAA GCGCCGCCGA GGATGAGGAG
GCCCTCAAGC GCAAGGGCGC CCAGGTCACC ACGCCCGTCA TCGCCCAGGT GCGCGAGGCC
CAGATGCAGA AATGGGTCTT CGGCGTGGGC ATGAGCACCG ACACCGGCCC GCGCCTGAGC
GTGGACCACA TCCACAACCG CCTGCCCTGG CTGGGCTGGC GCGCCGTCAC GCGCATGCGT
TTCGACCGCA AGAACCCGCT GATCTCCACG CAGTGGACCG CCCTGCCCGA TGAAACCCTG
TGGCGCTGGT TCACCACGGC CAAGGCCGAG CGCGCGCCCT CGGGCGACTT CGATGTCAAC
AGCCTGCAGC TGCGCGCCGG CCGTACCAAA TCCGAAGACC ACATCGACCG CAACTACTAC
CTGCAGTACG ACTACGCCAA GACCCAGGGC GAGGGCGCGC CGCCCTCCAG CTCATCGGTC
ACGGCCAACT ACGGCTGGAC GGGCCGCTAC TTCGACAGCA CGCTGGCGCC CTCCTCGGGC
TTCGGCTTCG CCTGGGAAGT CGGCGCGGGC ACCACGCTCA CGCCCCAGCG CACGCCGTTC
GGCCGCGTCT CGGGCCGCTG GCTCAGCCTG ATTCCCATCG GCGAGGTCGA TCCCGAGACC
AAGCGCCGCA GCCGCCTGGC GCTGCGCGCC TCCGGCGGCG CCCTGCTGGC CCGCAAGGAT
GCCGACCTGC CCGTCACCCA ACTGTTCATC ACCGGCGGCG ACAACACCGT GCGCGGCTAC
GGCTACCAAA GCATCGGTGC GCGCACCGAC AGCGGCAAGG TCATCGGCGG GCGCTACATG
GCCGTGGGCA GCATCGAATG GCAACGGCCC ATCGTCATCA AGGGCAACAC GCAGGACTGG
GAGCATGCCG TCTTCCTGGA CGCCGGCACC GTGGGCGATG CGCCCGACTC CATGTACATG
CGCGTGGGCG TGGGCACCGG CCTGCGCTGG CGCAGCCCCG TGGGACCCGT GCAGGCCGAC
ATCGCCTGGG GCGCCCAGGA AAAACAGCTG CGCCTGCACC TGCGCCTGGG CTTCAACTTC
TGA
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| Protein sequence | MPKLPPATAP ARGPAFLFLL SAALMLGGCS LLPSKNDDKD TDPSLIAATG DPAFSLVVDA
PKEVRELLEK HLELRRYRYQ SDLQRRELTR LLGATDANVR DLIGTLGYFS PTVTVEIKET
PESEEAPLEV TVKVDPGEPA TIARSQVRFA GVNADDPDGA SQRATIEEDW PLQPGQRFSQ
SSWSQAKSQG LRTLQSRRYP LARIDSSLAD IDADTHEADV SVAYAPGPAY TFGPLRIEGA
QRYDPVGTAR IARLPEGEEY DQTALVDAQL RLASSGYYDS VFLTLANVPQ QGESAAEDEE
ALKRKGAQVT TPVIAQVREA QMQKWVFGVG MSTDTGPRLS VDHIHNRLPW LGWRAVTRMR
FDRKNPLIST QWTALPDETL WRWFTTAKAE RAPSGDFDVN SLQLRAGRTK SEDHIDRNYY
LQYDYAKTQG EGAPPSSSSV TANYGWTGRY FDSTLAPSSG FGFAWEVGAG TTLTPQRTPF
GRVSGRWLSL IPIGEVDPET KRRSRLALRA SGGALLARKD ADLPVTQLFI TGGDNTVRGY
GYQSIGARTD SGKVIGGRYM AVGSIEWQRP IVIKGNTQDW EHAVFLDAGT VGDAPDSMYM
RVGVGTGLRW RSPVGPVQAD IAWGAQEKQL RLHLRLGFNF
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