Gene Daci_1634 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1634 
Symbol 
ID5747191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1829149 
End bp1830366 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content66% 
IMG OID641296715 
Productmajor head protein 
Protein accessionYP_001562663 
Protein GI160897081 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGATCG AAAAAGACAT TGAACAGATC AACACCAGCC TGCGCGAAGT GGGCGAACAG 
ATCAAGGCCC AGGCCGAGAA GGCCGACAAG GAGATCAAGG CACACGCCCA GCTCAGCCGG
GAGACCCGTG CCAAGGTCGA TGAACTGCTC ACCGAGCAGG GCACGCTGCG CGCGAATCTG
GCCACGGCCG AGCAACTGCT GGCGAAGCTC GCAAACGGCG GCGGTGGTGG CCAGCAGCAA
CCCCAGACCA TGGGCATGCA GGTCACCGAC TCGGAGGACT TCAAGGCCTT CGCTGCCAAC
CCCCGTGGTA GCTTCCGCAT GCCTGTGCAG GCGGCCATCA CCAGTGGCAG CGGCTCGGCC
GGCGATCTGA TCGTCCCGGA CCGCGTGCCC GGCATCGTGG CCCCGGGCCT GCGCCGACTG
ACCATCCGCG ATCTTCTGAA CTGGGGTCGC ACCGGCTCGA ATGCGGTGGA CTTCGCACGC
GAACTGGTGT TCACCAACAA CGCCGGCCCG GTGGGCGAAA ACCCGAGCGG CGGAAAGCCG
GAGTCGAACA TCACGTTCGA GGCGGCCCAG GTGCCCGTTG TCACCATCGC GCACTGGGTG
CCGGCATCCA AGCAGGTGCT GAGCGATGTG CCCATGCTGC AGTCGTACAT CGATGGCCGG
CTGCGCTATG GCCTGAAGCT CAAGGAAGAG CTGCAGCTGC TCAAGGGCTC TGGCGTCGGC
CTGAACATGG ACGGCATCTA CACACAGGCG ACGCCCTACG TGAACCCTGG TGTCGTGGTG
CAGGCGGAAA CGCGCATTGA CCGTCTGCGT CTCGCACTGC TGCAGGTCGA GCTGGCCGAC
TACTGGGCCG ATGGCATCGT CATCAGCCCG CTGGACTGGG CGGCCATTGA GCTGACCAAG
ACCGCCGACA ACGCCTATCT GTTCACCAAC CCCCGCACCC AGGAGCTGCC GTCGCTGTGG
GGTCGCAACG TGGTGCCGAC GCAGGCCATG GACCCAGCCG AGTTCCTGGT GGGCGCATTC
GGCGGCGGCT TGGCCGCCCA GGGCTGGGAC CGCGAGGACG TGAGCGTGTC GATCTCGTTC
GAGGACCGCG ACAACTTCGT CAAGAACATG GCGACGGTGC TGTGCGAAGA GCGCATTGCG
CTGACCGTGT TCCGTCCTGC CTCGTTCGTC AAGGGCGCAT TCACCGGCGT GGCGCCCCAG
CCGCCCGCAT CGTCCTGA
 
Protein sequence
MPIEKDIEQI NTSLREVGEQ IKAQAEKADK EIKAHAQLSR ETRAKVDELL TEQGTLRANL 
ATAEQLLAKL ANGGGGGQQQ PQTMGMQVTD SEDFKAFAAN PRGSFRMPVQ AAITSGSGSA
GDLIVPDRVP GIVAPGLRRL TIRDLLNWGR TGSNAVDFAR ELVFTNNAGP VGENPSGGKP
ESNITFEAAQ VPVVTIAHWV PASKQVLSDV PMLQSYIDGR LRYGLKLKEE LQLLKGSGVG
LNMDGIYTQA TPYVNPGVVV QAETRIDRLR LALLQVELAD YWADGIVISP LDWAAIELTK
TADNAYLFTN PRTQELPSLW GRNVVPTQAM DPAEFLVGAF GGGLAAQGWD REDVSVSISF
EDRDNFVKNM ATVLCEERIA LTVFRPASFV KGAFTGVAPQ PPASS