| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1550 |
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| Symbol | |
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| ID | 5747107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 1739220 |
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| End bp | 1742393 |
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| Gene Length | 3174 bp |
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| Protein Length | 1057 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641296631 |
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| Product | CzcA family heavy metal efflux protein |
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| Protein accession | YP_001562579 |
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| Protein GI | 160896997 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.893235 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGAGC GCATCGTCAA CATCGGCTTT TCGCGCCGCG GCGTGGTCTG GCTGGTCTTT
TGCTTCGCGG CCCTGTATGG CGTGTTCAGC TGGAAGCAGC TGCCGCTGGA GGCCTATCCC
GACATTGCCG ACGTGACCTC GCAGATCGTC ACCCAGGTGC CAGGCCTGGC GGCCGAGGAG
ATAGAGCAGC AGATCACCAT CCCGCTGGAG CGTGCCCTGC TGGCCACGCC CGGCATGCAC
GTGCTGCGCT CGCGCAGCCT GTTCGCGCTG TCGCTGATCA CCGTGGTCTT CGAGGACGGC
GTGGACGGCT ACTGGGCGCG CCAGCGCCTG AAGGAGCGCA TCGACGAGGT CACGCTGCCC
TATGGCGCCC GCGCCGGGCT GGACCCCTAC AGCTCGCCCA CGGGCGAGGT CTACCGCTAC
ACGCTGGAAA GCCCCGTGCG CAGCCTGCGC GAGCTGTCCG AGCTGCAGCA ATGGGTGGTG
ATCCCGCGCC TGAAGAAGGC CCAGTCCGTG GTGGACGTGA CCAACTTCGG CGGCCTGACC
ACGCAGTTCA TGCTGGAGCT GGACCCGGCG CGGCTGCTGC AGTACGGGCT GGCGCTGTCC
CAGGTGATCG AGGCCATCAA TGCCAACAAC GCCAGCGGCG GCGGCAGCGT CATCGACCGG
GGCGATGTCT CCTATGTGGT GCGCGGCGTG GGCCTGCTGG GCTCGCTGGA CGACATGGGC
AACGTGGTCG TCAAGACCAC GGACAGCGGC ACGCCCGTGC TGGTCAAGGA CCTGGGGCGG
CTGACCTACG GCAACGTGGA GCGGCGCGGC ATCCTGGGCA AGGACGGCAA CTCCGACACC
CTGCAGGGCA TCGTGCTGCT GCTCAAGGGC TCCAACCCCT CGCAGGCACT GGAGGGCATC
CATGCCGCCG TGGAGGAGCT CAACGGCAAG CTGCTGCCGC CCGACGTGAA GGTCGTGCCC
TACCTGGACC GCACCACGCT GATCGAGCGC ACCACCCACA CCGTGGGCAA GACCCTGGCC
GAAGGGCTGA TCGTCGTCAC CCTGGTGCTG CTGGTCTTCC TGGGCAGTCC GCGCGCGGCG
CTGATCGTGG CGCTGACCAT TCCCATGGCG CTGCTGCTGG CCTTCATCTT CATGCACCAT
GCGAAGATTC CGGCCAACCT GCTGTCGCTG GGCGCCATCG ACTTCGGCAT CCTGGTGGAC
GGCGCCGTGG TCGTGGTCGA GAACATCCTG CGGCGCCGTG AGGCCGACCA GAACCGGCCG
CTCACGCCCA GGGACGCCAT CACGGCCACG CTTCAGGTGG CGCGGCCCAT CTTCTTCGGC
ATGTGCGTGA TCGCGGCCGC CTACCTGCCG CTGTTCGCCT TCGAGCGCAT CGAGTACAAG
CTGTTCTCGC CCATGGCCAG CGCGGTGGGC GCGGCCCTGG TGGGGGCGCT GGCCGTGGCC
CTGCTGCTCA CGCCAGCCCT GGCCTGGCTG GCCTTCCGCA GGCCGCGCAA GATCTTCCAC
AACCCCGTGC TGCACCGGCT GGGTACGGCC TATGACCGCT TCCTGGGCGT GGCCGTGGGC
CGCGTGCGCT GGCTGGCGGG GGCGGTGGTG GCCTCGCTGC TGGCGCTGGG CGTGCTGGCC
GGCACCATGG GCCGCGACTT CCTGCCGTAC CTGGACGAAG GCTCCATCTG GCTGCAGGTG
CAGATGCCGC CCGGCATCAC GCTGGACAAG GCGCGCGACA TGGCCGACGC GCTGCGCAGC
GCCGCGCTGG AGTTCCCCGA GGTCTCCTAC ATCGTCACCC AGACCGGGCG CAACGATGAC
GGCACGGACT ACTGGACGCC CTCGCACATC GAGGCCAGCG TGGGCCTGCA TCCCTATGGC
GAATGGAAGT CGGGCCTGAC CAAGCAGCAG CTGATCGCGA AGATGGCCGC GCGCTTCGAC
CAGCTGCCCG GTTATTCCGT GGGCTTCATG CAGCCCATGA TCGACGGCGT GCAGGACAAG
CTGTCGGGCG CGCACAGCGA TCTCACGGTG AAGGTCTTCG GCCAGGATCT GGCCGAGGAC
CGGCGCGTGG CCGATGCACT GGTGGCTGTG CTGGAGAAAG TGCCCGGCGC GGCCGACGTG
GCCGTGGACG TGGAGCCGCC GCTGCCGAAC CTGCGCATTG CGCTGGACCG CGCCGCTGCC
GCGCGCTACG GCATCAATGC CTCCGACGTG GCGCAGCTCA TCTCCACCGG CGTGGGCGGG
GCCTCCATCG GCCAGCTCTA CGTGGGCGAG CGCAGCTACG ACATGGCCGT GCGCTTCACG
CCCGACACGC GCAGCAGCCC CGAGGCCATC GGCGCGCTGC GCCTGTCGGC CGCCAATGGC
GCCCAGGTGC CGCTGGCCGA CGTGGCGCGC ATCACCACCA CCGTGGGCCA GAGCGTCATC
GTGCGCGAGG GCGGGGAGCG CCACATCCTC GTCAAGCTCA ATGTGCGCGG CCGCGACCTG
GCGGGCTTCC TCAAGGATGC GCACACCGCC ATCGACCAGC ACCTGGACTA CGACCGCCAG
AAGCTGCACA TCGAGTGGGG CGGCCAGTTC GAGAACCTGC AGCGTGCCGA GGCGCGGCTG
CTCATGATCC TGCCGCTGAC GCTGGGCATC ATGCTGGTGC TGCTGTTCGG CGAGTTCGGC
AACATGCGCC AGCCGCTGCT GGTGCTGGGC GTGGTGCCGC TGGCCATGAT CGGCGGCTTT
GCGGGCCTGC ACCTGCGCGG CATGACGCTC AACGTCTCCA GCGCCGTGGG CTTCATCGCG
CTGTTCGGCG TGGCCGTGCT CTCGGGCGTG CTCATGGTCT CGCAGATCAA CCGCCTGCGC
CGCGAGGACG GCCTGGGCCT GCGCGAAGCC GTGCTCGAAG GCGCCTCCAG CCGCATGCGC
CCCGTGCTGA TGACGGCCAC CGTCGCCGCC TTCGGCCTCA CGCCGGCCAT GCTGGCCACG
GGCCTGGGCA GCGACGTGCA GCGGCCCCTG GCCACGGTCG TGGTCTGCGG CCTGTTCAGC
GCCACCTTGC TGACCCTGCT GCTGCTGCCC AACCTCTACT ACGTGATCGA GGCCCGTGCC
GCCCGCGCGG CCGAGCGCCG CCAGCGCCGC GCCGCTGAAC GCAGTGAGAG CGGCGATCTG
GATGCCGCCG AGGACGAGGG CGGGCATCGC ACCGCAACGA GCCAACCCCA TTGA
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| Protein sequence | MIERIVNIGF SRRGVVWLVF CFAALYGVFS WKQLPLEAYP DIADVTSQIV TQVPGLAAEE
IEQQITIPLE RALLATPGMH VLRSRSLFAL SLITVVFEDG VDGYWARQRL KERIDEVTLP
YGARAGLDPY SSPTGEVYRY TLESPVRSLR ELSELQQWVV IPRLKKAQSV VDVTNFGGLT
TQFMLELDPA RLLQYGLALS QVIEAINANN ASGGGSVIDR GDVSYVVRGV GLLGSLDDMG
NVVVKTTDSG TPVLVKDLGR LTYGNVERRG ILGKDGNSDT LQGIVLLLKG SNPSQALEGI
HAAVEELNGK LLPPDVKVVP YLDRTTLIER TTHTVGKTLA EGLIVVTLVL LVFLGSPRAA
LIVALTIPMA LLLAFIFMHH AKIPANLLSL GAIDFGILVD GAVVVVENIL RRREADQNRP
LTPRDAITAT LQVARPIFFG MCVIAAAYLP LFAFERIEYK LFSPMASAVG AALVGALAVA
LLLTPALAWL AFRRPRKIFH NPVLHRLGTA YDRFLGVAVG RVRWLAGAVV ASLLALGVLA
GTMGRDFLPY LDEGSIWLQV QMPPGITLDK ARDMADALRS AALEFPEVSY IVTQTGRNDD
GTDYWTPSHI EASVGLHPYG EWKSGLTKQQ LIAKMAARFD QLPGYSVGFM QPMIDGVQDK
LSGAHSDLTV KVFGQDLAED RRVADALVAV LEKVPGAADV AVDVEPPLPN LRIALDRAAA
ARYGINASDV AQLISTGVGG ASIGQLYVGE RSYDMAVRFT PDTRSSPEAI GALRLSAANG
AQVPLADVAR ITTTVGQSVI VREGGERHIL VKLNVRGRDL AGFLKDAHTA IDQHLDYDRQ
KLHIEWGGQF ENLQRAEARL LMILPLTLGI MLVLLFGEFG NMRQPLLVLG VVPLAMIGGF
AGLHLRGMTL NVSSAVGFIA LFGVAVLSGV LMVSQINRLR REDGLGLREA VLEGASSRMR
PVLMTATVAA FGLTPAMLAT GLGSDVQRPL ATVVVCGLFS ATLLTLLLLP NLYYVIEARA
ARAAERRQRR AAERSESGDL DAAEDEGGHR TATSQPH
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