Gene Daci_1540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1540 
Symbol 
ID5747097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1727515 
End bp1728549 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content71% 
IMG OID641296621 
Producthypothetical protein 
Protein accessionYP_001562569 
Protein GI160896987 
COG category[R] General function prediction only 
COG ID[COG4111] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.906535 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGGTCT GCTGTGCCGG GCTCGAAGCT GCCCCTGCAA CCCACCATAA TCACCCATCC 
CGCCAACCGA CCTCCCTCAC CTTCGTGCCC CACCCCACCA GTCCCGCAGC CTCTCCCATC
CATGCCGAAC TCGTCGCCGT GCTGGCGGCG GTGACCCAGG GCACGCCGCG CGTGCTGACA
ACGGCGGACG GGCAGTTGCT GCCGGCGGGG CCGTTCGAGG TGGGACACCG TTCGCTGCAG
GCTGGCCTGC GCGCCTGGGT GGAGGAGCAG ACCCATCACC CGCTGGGCTA CATGGAGCAG
CTCTACACCT TTGCCGATGG CGATCGCACC GATGCCAGCG GGGCGCGCGT GATCTCGGTC
AGCTACCTGG GGCTGACGCG CGAATCCGCG GACCGCAGCG CGGGGCAGGC CGTCTGGCAG
GACTGGTACC GCTACTTTCC CTGGGAAGAC TGGCGCGGCG GCGAGCCGGC CCTGCTGCGC
TCGCACATCG CTCCGCGCCT GCATGCCTGG ATGGCCGAGG CGCGCGGCGC CCAGCGTGCG
CTGCGGCGCC AGCGCGCGGA CATCGCCTTC GGCCTGGACG GCGGGCCCTG GAACGAGGAC
ATGGTGCTGC AGCGCTACGA GCTGCTGTAC GAGGCCGGGC TGGTGCAGGA GGCGGCCCAC
CGCGTCCATG GCGCGGCCGC CATGCTGCCT GGCGAGGCCA TGCACCACGA CCACCGCCGC
ATCCTGGCCA CGGGCATGGC GCGGCTGCGC GCCAAGATCA AGTACCGGCC CGTGGTGTTC
GAGCTGATGC CGCCCGAGTT CACGCTGCTG CAGCTGCAGC AGACCGTGGA GGCCCTGGCC
GGGCGCGGGC TGCACAAGCA GAACTTCCGC CGCCTGATCG AGCAGCAGGA TCTGGTCGAG
GAGACCGGCC AGCTCACGGT GGGCTCTGCG GGCCGGCCGG CCAAGCTGTT CCGCTTTCGC
AGCGATGTGC TGCTGGAGCG GGCCATCTCG GGCAGCAAGC TGCCCCTGGC CAAGGGCATC
GACGGTTCTC CCTGA
 
Protein sequence
MAVCCAGLEA APATHHNHPS RQPTSLTFVP HPTSPAASPI HAELVAVLAA VTQGTPRVLT 
TADGQLLPAG PFEVGHRSLQ AGLRAWVEEQ THHPLGYMEQ LYTFADGDRT DASGARVISV
SYLGLTRESA DRSAGQAVWQ DWYRYFPWED WRGGEPALLR SHIAPRLHAW MAEARGAQRA
LRRQRADIAF GLDGGPWNED MVLQRYELLY EAGLVQEAAH RVHGAAAMLP GEAMHHDHRR
ILATGMARLR AKIKYRPVVF ELMPPEFTLL QLQQTVEALA GRGLHKQNFR RLIEQQDLVE
ETGQLTVGSA GRPAKLFRFR SDVLLERAIS GSKLPLAKGI DGSP