Gene Daci_1539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1539 
Symbol 
ID5747096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1726252 
End bp1727400 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content60% 
IMG OID641296620 
Producthypothetical protein 
Protein accessionYP_001562568 
Protein GI160896986 
COG category[S] Function unknown 
COG ID[COG4804] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACCC ACCTGCCCGC CGACTATCCG GCGCTGCTGG CCGATATCAA GCAGCGTGTC 
CGCCATGCCC AGACGCATGC CATGCTGGCG GTCAATGCCG AATTGATCCG CCTGTATTGG
GATATCGGGG CACTGATCGA CCAGCGCCAG AAACGGGAAG GCTGGGGTGC CGCAGTCATC
CCTCGGCTGG CCAAGGATCT GCACAACGAA CTGCCGGAGG AAAAAGGTTT TTCCGAGCGC
AACATCAAGC GCATGCTGGC TTTTTATCGC GAGTATCCCT CTCTGGCCGC CACAGCCGGG
AGCACGGAGA AAGTGCCACA GGCCGTGGCA CAACTTGCCC CCGGCGAAAA AGTGCCACAG
GCTGTGGCAC AAAGCCGCCT GGCGCCGGGG GTGGCGGCAG ATGGCGCACA GGTGTTTGCT
GCTGATGTTC TGCTGTCCCT GCCGTGGGGC CACCATGCCG AGCTGATCGC CAAGGTCAAG
GAGCCGGGCG CACGCCATTG GTACATGTGC GCAGCCATCG AAAACGGTTG GAGCCGAAGT
GTCCTGCTGA TGCAGATCGA AACAGCCGCG CACCTGCGAC AAGGCAGAGC TGCCAGCAAC
TTCGCCTTGC GCCTGCCTCC GCCGGATTCC GACCTGGTAC AGCAAACGCT CAAGGACCCT
TACCTGTTCG ACTTCCTGAC GTTGGAATCA GGTTTCCATG AGCGTGAGTT GGAAACCGGT
CTGATCACCC ATCTGGAAAA ATTTCTCCTG GAGCTGGGCC AGGGCTTCGC CTTCGTGGGG
CGCCAATATC ACCTGGACCT TGCCGGAGAC GATTTCTACA TAGACCTGCT GTTCTACCAT
CTCAAGCTGC GTTGCTACGT GGTCATCGAC CTCAAGCGGG GCGATTTCAA GCCTGAATAC
GCGGGCAAGA TGAACTTCTA CTGCAACGTT GTGGACGACA GGTTGCGACA CGCAACCGAC
CAACCCACCA TCGGTTTGAT CCTGTGCCAG AAACCCAATC ACGTGCTGGC CGAGTATGCG
CTGCGCGGCG TGGACAAGCC CATCGGCGTT TCCGGTTTCG AGCTCACCCG TGCCTTGCCG
GAAACCCTGC AAAGCAGCCT GCCCAGCATC GAACAGATCG AGCGCGAGCT GGGAGGCGGG
CATGAATGA
 
Protein sequence
MSTHLPADYP ALLADIKQRV RHAQTHAMLA VNAELIRLYW DIGALIDQRQ KREGWGAAVI 
PRLAKDLHNE LPEEKGFSER NIKRMLAFYR EYPSLAATAG STEKVPQAVA QLAPGEKVPQ
AVAQSRLAPG VAADGAQVFA ADVLLSLPWG HHAELIAKVK EPGARHWYMC AAIENGWSRS
VLLMQIETAA HLRQGRAASN FALRLPPPDS DLVQQTLKDP YLFDFLTLES GFHERELETG
LITHLEKFLL ELGQGFAFVG RQYHLDLAGD DFYIDLLFYH LKLRCYVVID LKRGDFKPEY
AGKMNFYCNV VDDRLRHATD QPTIGLILCQ KPNHVLAEYA LRGVDKPIGV SGFELTRALP
ETLQSSLPSI EQIERELGGG HE