| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1530 |
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| Symbol | |
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| ID | 5747087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 1717384 |
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| End bp | 1719309 |
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| Gene Length | 1926 bp |
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| Protein Length | 641 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641296611 |
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| Product | peptidase M61 domain-containing protein |
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| Protein accession | YP_001562559 |
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| Protein GI | 160896977 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3975] Predicted protease with the C-terminal PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.265264 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTCTC CCCTCGCCGC CACCGCCGCT GCCACTGCCG CAGCGGACAT CCACTACCGC
GTGCAGGCCC TTGATGTGGA CGCGCACCTG TTCAGCGTGC AACTGCACAT CGCCCGCCCG
GCCGCTGGCC AGACCCTGTC GCTGCCGGTC TGGATTCCCG GCAGCTATCT GGTGCGGGAA
TTCTCCAAGA ACCTCCAGGG CCTGTCTGCC GAGCAGGACG GCCGCCCCGT CACGCTGACC
CAGCAGGGCA AGAACCTCTG GCAGGCCGAT TGCGCAGCCG GCGTGCCGCT GGTGCTCCAC
TACCAGTTCT GCGCCTATGA CAGCTCGGTC CGCACGGCCT GGCTGGACCG CCGCCGCGGC
TTTTTCAACG GCACCAGCCT GTGCCTGCGC GTGCACGGCC AGGAAGACAG GCCGCACACG
CTGCAGCTGC TTGCGTCGGA CGCCACCGCA TCGTGGCAGG TGGCGACCGG CCTGGACGCC
GTGGACACCG ATGCGCGCGG CTGGGGCCTG TACCGCGCCG CCCACTACGA CGAATTGGTG
GACTGCCCCG TGGAGATGGG CAGCTTCTGG CGCGGCGACT TCGTGGCCGC GGGCGTGCCG
CACAGCTTCA TCGTGGCGGG CGCCGCGCCC AGCTTCGACG GCGCGCGCCT GATTGCCGAT
GCACGCAGGA TCTGCGAGAC CGTGCTGGCC TTCTGGCACG GTACGGGCGA GCAGGCCACG
CCCGCGCCCA TGCAGCGCTA CGTGTTCATG CTCAACGTGG TCGATGACGG CTATGGGGGC
CTGGAGCACC GCAATTCCAC GGCCCTGATC TGCGGCCGGC GCGACCTGCC GCGCGTGGGC
GAGCGCAAGG CCGCCGAGGG CTACACCACC TTGCTGGGCC TGATCAGCCA CGAGTACTTC
CACACCTGGA ACGTCAAGCG CCTGCGCCCG GCCGAATTCG CACGCTACGA CTACGGGCAG
GAGAACTACA CCGAGCTGCT GTGGTTCTTC GAAGGCTTCA CCAGCTACTA CGACGACCTG
CTGCTGCGCC GCGCCGGCCT GATCGACAAC GCCCAGTACC TCAAGCTCAT CACGCGCACC
ATCAACCAGG TGCTGCAGAC GCCGGGCCGA CACCTGCAGT CCGTGGCCCA GGCCAGCTAT
GACGCCTGGG TCAAGTACTA CCGCCAGGAC GAGAACACGC CCAACCAGAC CGTCAGCTAC
TACACCAAGG GCTGCCTTGT CGCGCTGGCC CTGGACCTGC AACTGCGCCG CGAAGGCCGC
AGCACGCTGG ACGACGTGAT GCGCGCGCTG TGGCAGCGCT GCCAGGGCGG TCCCATGCGC
GAGGCCGACG TGCTGGCCGT GCTGCAGGAC CTGGGCGGGC GCAGCTTCGC GCCCGAAATC
ACGCAATGGG TGCACGGCAC CGACGACCTG CCGCTGGCCG AACTGCTGGC CGCGCACGGC
GTGCAGGCCA AGGCCGAACC GGCGCAGACT GCCCAGCGCC TGGGCCTGCG CGTGCAGGAA
AGCCAAGGCA TCACCATCAA GACCGTGCTG CGCGGCAGCC TGGCCGAGCG CGCAGGCTTC
ATGGCGGGCG ACGAATGGCT GGCCATCGAG CTGCCCACCG GCGCCGAGGA TTCACAGCCC
GCGCGCTGGC GCATCACCCG GCTGGACGAC GTAGCTCTTT ATGCAGGCAC GGCCCTGGAC
ATCGTCGCCT GGGTGGCCCG CGACCGGCAG ATCCTGGCCT TGACCCTGCC CTGGGGCTCG
GGCCTGCTGT CCGAGGCCGC CGCCATGGTG GAGAAAACGG ACAACGGCGA TGCAAAAGCT
GCCACATCCG GCACCCTGGC GGCGCCCGCC CCCAGCAATC TCGGACTGGA AATCACGGAC
GAGGAGACCG CTGGACGCTG GCTGGCCGGG CACACGGGCA GCGCGCAGGC GCCTGCCACG
CCCTGA
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| Protein sequence | MTSPLAATAA ATAAADIHYR VQALDVDAHL FSVQLHIARP AAGQTLSLPV WIPGSYLVRE
FSKNLQGLSA EQDGRPVTLT QQGKNLWQAD CAAGVPLVLH YQFCAYDSSV RTAWLDRRRG
FFNGTSLCLR VHGQEDRPHT LQLLASDATA SWQVATGLDA VDTDARGWGL YRAAHYDELV
DCPVEMGSFW RGDFVAAGVP HSFIVAGAAP SFDGARLIAD ARRICETVLA FWHGTGEQAT
PAPMQRYVFM LNVVDDGYGG LEHRNSTALI CGRRDLPRVG ERKAAEGYTT LLGLISHEYF
HTWNVKRLRP AEFARYDYGQ ENYTELLWFF EGFTSYYDDL LLRRAGLIDN AQYLKLITRT
INQVLQTPGR HLQSVAQASY DAWVKYYRQD ENTPNQTVSY YTKGCLVALA LDLQLRREGR
STLDDVMRAL WQRCQGGPMR EADVLAVLQD LGGRSFAPEI TQWVHGTDDL PLAELLAAHG
VQAKAEPAQT AQRLGLRVQE SQGITIKTVL RGSLAERAGF MAGDEWLAIE LPTGAEDSQP
ARWRITRLDD VALYAGTALD IVAWVARDRQ ILALTLPWGS GLLSEAAAMV EKTDNGDAKA
ATSGTLAAPA PSNLGLEITD EETAGRWLAG HTGSAQAPAT P
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