Gene Daci_1510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1510 
Symbol 
ID5747066 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1696062 
End bp1696616 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content68% 
IMG OID641296590 
ProductNLP/P60 protein 
Protein accessionYP_001562539 
Protein GI160896957 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGCTG GTGTTTCGAC TTCCCTTGCG GTGTCTCCGG TGACCGGGGC GCGGCTCTCG 
CGCCGTGACT GGGGTCTGCT GGCGGCCGCC GTGCTGCTGG CTGGCTGCTC TTCCGCTCCG
CGCAAAGGCT CGGGCCCGGC GCCGGTGCCT TCGCCGCAGG CGCTCAATCT GGACGGCGAA
TTGCGCGAGG CCTTGCTGGC GCGCACCATG CTTGTGGTCA ACACGCCCTA TACCTATGGC
GGCAATTCGC CCGAAGGCGG TTTCGACTGC AGCGGCCTGA TCCAGTGGGC CGTGGGCGGC
ATCACCGAAA ACCGCCTGCC GCGCACCACG GCGCAGTGGG CGCAGTTCAG CAATCCCGTG
GGCAGCCGCA GCCTGCAGCG CGGCGACTTC GTGTTCTTCA ACACCCTGGG CGCGCGCTAT
TCGCACATGG GCATCTTCGT GGGCAACGGC CAGTTCGTGC ATGCACCGTC CAGCGGCGGC
ACGGTGCAGC GCGTGCGCAT GGACAACACC TATTTCGCCA AGCGCTTCAC CGAGGCGCGC
AGCATCTTCG CCTGA
 
Protein sequence
MKAGVSTSLA VSPVTGARLS RRDWGLLAAA VLLAGCSSAP RKGSGPAPVP SPQALNLDGE 
LREALLARTM LVVNTPYTYG GNSPEGGFDC SGLIQWAVGG ITENRLPRTT AQWAQFSNPV
GSRSLQRGDF VFFNTLGARY SHMGIFVGNG QFVHAPSSGG TVQRVRMDNT YFAKRFTEAR
SIFA