| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1418 |
|---|
| Symbol | |
|---|
| ID | 5746973 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 1575796 |
|---|
| End bp | 1576365 |
|---|
| Gene Length | 570 bp |
|---|
| Protein Length | 189 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641296497 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001562447 |
|---|
| Protein GI | 160896865 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1738] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00697] conserved hypothetical integral membrane protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACCGC GCCCGCCCCG TTGCGTCGCC CCCTCGCGCA CCCAGCTGCT GGCCGCCATC
GCTGCCATGG GCGTGGTGGT GCTGTCGTCC AACATCCTGG TGCAGTACGC CATCAACGAC
TGGCTGACCT GGGGCGCCAT CACCTATCCG TTCGCCTTCC TGGTGAGCGA GCTGGTCAAC
CGCAGCTTCG GCCCGCAGCA GGCCCGGCGC GTGGCCTGGG TGGGCTTTGC CGTGGCCGTG
GCCGCCTCGC TGGTGCTGGC GCCGCCGCGC ATCGCGCTTG CCTCGGGCGC GGCCTTCATT
GCCTCGCAGT GGCTGGACAT CGGTGTGTTC CACCGCCTGC GTGCGGGCCG CTGGTGGCGT
GCCCCCCTGG TGGCCACGCT GCTGGCCGCC TGCCTGGACA CCTTCCTGTT CTGGAGCATC
GCCTTCGCAG GCGCCGCCGA GCCCTGGGTG ACCTGGGCGC TGGGCGACCT GGGCGTGAAG
CTGGTGCTGG GCGTGGCGCT GCTGCTGCCG TTCCGGCTCG CCATCGCCCG GTGGTGGAAA
GGCCCATCGG CAATCGCCAG CGCCAAATAA
|
|---|
| Protein sequence | MTPRPPRCVA PSRTQLLAAI AAMGVVVLSS NILVQYAIND WLTWGAITYP FAFLVSELVN
RSFGPQQARR VAWVGFAVAV AASLVLAPPR IALASGAAFI ASQWLDIGVF HRLRAGRWWR
APLVATLLAA CLDTFLFWSI AFAGAAEPWV TWALGDLGVK LVLGVALLLP FRLAIARWWK
GPSAIASAK
|
|---|
| |