Gene Daci_1316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1316 
Symbol 
ID5746871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1462208 
End bp1463089 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content59% 
IMG OID641296395 
Productmethyltransferase type 12 
Protein accessionYP_001562345 
Protein GI160896763 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0420915 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGATC GATTGAGCTT GTGGGGGCGC CGTTGGCAGG AGCGACTGTT CGGCTTGGCT 
CCGTGGGATG CAGGCAAGAT CACGGATGAG TGGTTTCGCG CACATTTCGA CTATGCGGCC
GACGTGGTAC ATAGTTGGCT GGGGCAGGAG TTGGACATGT CCAAGGCGCG GCTGTTGAAC
TTCGGCTGCG GCGACGGCAT CACAGACTTG GCCTTGGTGC TGCGCCATGG GGCCACCCGA
ATCCACGGCA TCGACATCCG CCAGGAGTAC ACCAAGTTGC CGCGCATCGC TCGCGAGCAA
CTGGGGATGT CGCGTGTGCC TTCGGCGCTC AGCTTTGAGA CCATCGTGCC CAACGAGCCC
CTGGCCACGC GGCATGCGGG CTACGACGGA ATGCTCACAT GGTCTACCTT CGAGCATGTG
CAACGCGACA AGGTGCTGCC CATTCTTGCC GATCTGCATG CCTGTCTACG CCCGGGCGGG
GTGTTCTTTT TGCAGATCGA GCCGCTATTC CATTCACCAT GGGGATCTCA TCTGCGGCGC
TACGACGATG TGCCCTGGCA TCATCTGATG GCGTCGGAGG AAGAGTTGTG GCGCATCATC
GAAGCCCATG ATGGCCCACT CGATGCATCG GAGGTGGATT TCGGTTTTTC TGATTTTGGC
GTTGACGGCT ACAAGCGCTT CGTGTTCAGG GAATACCAGG CGTTGAACAG ACTTACAGCC
GATGAGTTGG TGGAGTTGAC AAAGCAGGCA GGCTTCGAGT TGCTCCGTCA GGAGCGCCGC
CAGGTGGATT TGCCGATTCC CGCTCCACTG AAGGGCCGTT ACCAGGATGA CTGGCTGCTG
AACAACGAGA TCATGCTGCT GTTGGGTAAG AGCACTACCT GA
 
Protein sequence
MADRLSLWGR RWQERLFGLA PWDAGKITDE WFRAHFDYAA DVVHSWLGQE LDMSKARLLN 
FGCGDGITDL ALVLRHGATR IHGIDIRQEY TKLPRIAREQ LGMSRVPSAL SFETIVPNEP
LATRHAGYDG MLTWSTFEHV QRDKVLPILA DLHACLRPGG VFFLQIEPLF HSPWGSHLRR
YDDVPWHHLM ASEEELWRII EAHDGPLDAS EVDFGFSDFG VDGYKRFVFR EYQALNRLTA
DELVELTKQA GFELLRQERR QVDLPIPAPL KGRYQDDWLL NNEIMLLLGK STT