| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1302 |
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| Symbol | |
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| ID | 5746857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 1448210 |
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| End bp | 1448656 |
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| Gene Length | 447 bp |
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| Protein Length | 148 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641296381 |
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| Product | general secretion pathway protein H |
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| Protein accession | YP_001562331 |
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| Protein GI | 160896749 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4970] Tfp pilus assembly protein FimT |
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| TIGRFAM ID | [TIGR01708] general secretion pathway protein H
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0108223 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGAAGCGCG CCCAGGGTTT CACGCTGATC GAGCTGCTGG TGGTGTTCGC CATTCTTGGC
GCCATCATCG GCATCGTGCC GCCTGCCATG GGCAAGCTGC GCGATGCCGT GGACTATCGG
CAGACGGTGC AGGACGTGAC GGCCCTGCTG CGCAAGGCGC GCCAGCAGGC CACGCTGCAG
GGCATGCCTG TGGCATTCGC GATCAATACG AATAGCCGCC AGTACGGCAT CGCCGGCCAA
GCCACGGCCA AGCTGCCCGA CAGCCTGACG GTGCAACTGA CCACAGCAGC CGGCATGGCG
CTTGCCGATG GCAGCCAGAC CATCGTCTTT CTGCCCGAAG GCGGCGCCAC GGGGGGCAGC
ATTTCGATCG CCCGCGCGCA AAGCGGCGGT GGCGTGCGCC TGCGTGTGGA CTGGCTGTCC
GGCCAAGTCA CCAAAGAGGC TCTGTAA
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| Protein sequence | MKRAQGFTLI ELLVVFAILG AIIGIVPPAM GKLRDAVDYR QTVQDVTALL RKARQQATLQ
GMPVAFAINT NSRQYGIAGQ ATAKLPDSLT VQLTTAAGMA LADGSQTIVF LPEGGATGGS
ISIARAQSGG GVRLRVDWLS GQVTKEAL
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