| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1300 |
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| Symbol | |
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| ID | 5746855 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 1446461 |
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| End bp | 1447678 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641296379 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001562329 |
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| Protein GI | 160896747 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0254672 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGATT ACAGCTGGGA GGCCGTGGAC AGCCGCGGTC AGATGGTCAA GGGCACCTAT
TCCGCCGCAG CCGTGGCCGA GGTGGTGGTG CACCTGCGCA AGAGCCGCCT GTCGCCCATC
AAGGTCGAGG AAGCCGCAAG CCTGGGCAAC GTGCCGCTGG CGGCGCGTGC GCTCAAGAAA
GGCCGCATCA AGGCCGACGA CATCCAGGGC ATGACCACCG AGCTGGCCAT CATGATGCGT
GCCGGCCTGT CGCTGGACAA CGCGCTCAAG GTCCTGGTCG AGATGAGCCA CAAGGTGCAG
ATGCAGGCCA TGCTCCAGTC CGTGCTCGAC AGCGTCAAGG CCGGCATGCC GCTGAGCCAG
GCACTGGGCA AGCACCACGA CCTGTTCGGC GACTTCTATA TCAACATGGT GCGCTCAGGC
GAAGCCAGCG GCCAGATGTC GGGCGTGCTC AACCGGCTGG TGGAACACAT GGCGCGCCAG
CGTGCCCTGC GCGACAGCGT GGTCTCGGCC ACCATCTATC CTGCCATCCT GCTGGGCGTG
GCTGTGCTGT CCCTGGTGGC CATGCTGGGC TTCGTGGTGC CGCAGTTCGA GCAGCTTTTC
AACGACATGG GTGACGCGCT GCCCCTTCCC ACGCAATTCG TGATGGGGCT GGGCCATGCG
TTTCGCAGCT ACGGCTGGGC GGTGTTCATC GTGCTGGGCG CGCTGGCCTG GGTCTTAGCC
CGCTGGGCCA AGAGTCCCAA GGGCCGCCAG ACCTGGCAAT CGTGGCTGCT GGGCCTGCCG
GGCCTGGGTG GCGTGGTGCG CAAGTACCAG CTCACCCTGT TCAGCCGCTC GCTGGGCACG
CTGCTGGGCA ACGGCGTCAC GCTGCTGACC GCACTGCGCA TTGCCAGCGA CACGGTCTCC
AACGTCGCCA TCCGCGAGCG CCTGGAAAAA ATGGGCCCCA TGGTCAAGGA AGGCCATCGC
ATGGCCCATG CCGCCCAGAA AACCGGAGAA TTCGAGCCCC TGGCCCTGAA TCTGGTGCGG
GTCGGCGAGG AAACCGGCCG CCTGGGCGAC ATGATGCTGG AGCTGTCCAA CATATTGAAC
CGCGAGGTCG AAAACGCGAT CAAACGCCTC CTGACCATGT TGGAGCCGGC GCTGATCCTG
GTCCTCGGTA TCCTTATCGC CTCCATCATC GTGTCGATCC TGCTCGGAAT CCTGTCCGTC
AACGATCTGG CCGTCTGA
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| Protein sequence | MPDYSWEAVD SRGQMVKGTY SAAAVAEVVV HLRKSRLSPI KVEEAASLGN VPLAARALKK
GRIKADDIQG MTTELAIMMR AGLSLDNALK VLVEMSHKVQ MQAMLQSVLD SVKAGMPLSQ
ALGKHHDLFG DFYINMVRSG EASGQMSGVL NRLVEHMARQ RALRDSVVSA TIYPAILLGV
AVLSLVAMLG FVVPQFEQLF NDMGDALPLP TQFVMGLGHA FRSYGWAVFI VLGALAWVLA
RWAKSPKGRQ TWQSWLLGLP GLGGVVRKYQ LTLFSRSLGT LLGNGVTLLT ALRIASDTVS
NVAIRERLEK MGPMVKEGHR MAHAAQKTGE FEPLALNLVR VGEETGRLGD MMLELSNILN
REVENAIKRL LTMLEPALIL VLGILIASII VSILLGILSV NDLAV
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