| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1265 |
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| Symbol | |
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| ID | 5746820 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 1407945 |
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| End bp | 1409645 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641296344 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001562294 |
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| Protein GI | 160896712 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGCTG CGCCCTGGCT CAAGAACTAT CCCGCCGATG TGCCTCATGA GGTGCATCCC
GAGCAATACC GCTCGCTCAC ACACCTGCTG GAGGAGGCCT TCACCCAGCA TGCGGACCTG
CCCTTTTCGG TCTGCATGGA TCGCTGGATG AGCTACCGCG AGCTGGACCA GCTGTCCACC
CGCCTGGGCG CCTGGCTGCA GGGACTGGGC CTGGAGCCCG ATGCGCGCGT GGCCATCATG
CTGCCCAATG TGCCGCAGTT CGCCGTGAGC ATGGCGGCCG TGCTGCGCGC CGGCTACACC
TGCGTCAACG TCAATCCGCT GTACACCCCG CGCGAGCTGG AGCACCAGCT CAAGGACTCG
GGCGCCACGG CCATCATCAT CCTGGAGAAC TTCGCCCACA CCCTGGCCGA CGTGATCGAG
CGCAGCGCCA TACGCCATGT CTGCGTCACG GCCATGGGCG ATCTGCTGGG CGGCATGTAC
GGCAGCTGGA TCACCTTCGC CGTGCGCCAC CTGGCCAAGA TGGTGCCGGC CTACAGCCTG
CCGCTGGACG GCGCCGGCGG CACGGTGCGC GAGGTCACGA CCTTTTCCCA GGCGCTGGCG
CGCGGCGCCC AGAAAGAGCT GCGGCCCAGC CAGGCGGGGC TGGATTCGGT GGCCTTTCTC
CAGTACACGG GCGGCACCAC GGGCCTGTCC AAGGGCGCCG TGCTCACCCA CCGCTGCATC
GTGGCCGCCA CGCTGCAGGC CCATGCCTGG TTCACGCCCG CGCTGCATGG CCGCGTGAAG
GCCCAGGACA CGCACATCAT CGCGGCGCTG CCGCTGTATC ACATCTTCGC GCTCACGGTG
AGCCTGTTTG CCATGCGCAT GGGCGCCAGC CTGAGCCTGA TCCCCAATCC GCGCGACATC
CCCAAGTTCG TCAAGGTGCT GCAAAAACGG CCCTTCCACA TCCTGCCGGC CGTCAACACC
CTGTTCAACG CCCTGCTCAA CAACGCCCAG TTCCGCGAGC TGGACTTCTC GCAACTGCGC
GTGTCGCAGG CCGGGGGCAT GGCCGCCAGC GAGGGCACGG CGCGCCAGTG GCAGCAGGTC
ACGGGCAGCG TGATGATCGA AGGCTGGGGC ATGAGCGAGA CCTGCGCCAT CGGCACCAAC
AACCCCGTCG TCACCACCTC CTTCAGCGGC ACCATCGGCC TGCCGCTGCC GGGCATCTCC
ATCGCCATCA AGGACGACGA AGGCCGCGAC CTGCCCATGG GAGAGGCCGG CGAGCTGTGC
ATCAAGGGCC CCAACGTCAT GCGCGGCTAC TACAACCAGC CCGACGAAAC CGCCAAGGCC
TTCACGGCCG ACGGCTACAT GCGCACCGGC GACATCGGCG TGATGGACCA GGAGGGCTTC
ACCCGCATCA TCGACCGCAA GAAGGACATG ATGGTGGTCA GCGGCTTCAA CGTCTATCCG
AACGAGCTGG AGAACGTGAT CTCCATGTGC CCCGGCGTGC TCGAATGCGC AGCCGTGGGC
GTGGCCGATG AGCGCCAGGG CGAGGCCATC AAGGTCTACG TGGTGCGCAG CGACCCGGCA
CTGACCGAGG ACCAGGTCAT GCGCTTTTGC CATGACCAGC TCACCGGCTA CAAGCGCCCG
CGCACGGTGG AGTTCCGCGA CGAACTGCCC AAGACCAACG TAGGCAAGAT CCTCAGGCGC
GCCCTGCGCG ATCCCGCCTG A
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| Protein sequence | MDAAPWLKNY PADVPHEVHP EQYRSLTHLL EEAFTQHADL PFSVCMDRWM SYRELDQLST
RLGAWLQGLG LEPDARVAIM LPNVPQFAVS MAAVLRAGYT CVNVNPLYTP RELEHQLKDS
GATAIIILEN FAHTLADVIE RSAIRHVCVT AMGDLLGGMY GSWITFAVRH LAKMVPAYSL
PLDGAGGTVR EVTTFSQALA RGAQKELRPS QAGLDSVAFL QYTGGTTGLS KGAVLTHRCI
VAATLQAHAW FTPALHGRVK AQDTHIIAAL PLYHIFALTV SLFAMRMGAS LSLIPNPRDI
PKFVKVLQKR PFHILPAVNT LFNALLNNAQ FRELDFSQLR VSQAGGMAAS EGTARQWQQV
TGSVMIEGWG MSETCAIGTN NPVVTTSFSG TIGLPLPGIS IAIKDDEGRD LPMGEAGELC
IKGPNVMRGY YNQPDETAKA FTADGYMRTG DIGVMDQEGF TRIIDRKKDM MVVSGFNVYP
NELENVISMC PGVLECAAVG VADERQGEAI KVYVVRSDPA LTEDQVMRFC HDQLTGYKRP
RTVEFRDELP KTNVGKILRR ALRDPA
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