Gene Daci_1221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1221 
Symbol 
ID5746776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1362466 
End bp1363413 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content71% 
IMG OID641296300 
Producthypothetical protein 
Protein accessionYP_001562250 
Protein GI160896668 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAGAC GCGTCTTTCT GGCAGGCAGC CTGGCGGCTG CCGCGCTTCC GCTGGTGCGG 
GCCAGCGATT TTCCGAGCCG GCCGGTGCGG GTGATTTCCC CGTATGCGGC GGGCGGGGGG
CCTGATGTGC AGTTGCGCCA GGCCGGCCCG GTGCTGGGGG AGATCCTGGG GCAGTCCATC
GTGATCGAGA ACAAGGTGGG CGCGGCCGGC GTGCTGGCCG CGCAGTATGT GGCGCAGCAG
CCCGCCGATG GCTACACCTG CCTGATGGGC TCCAACACCC ACCTGATCCA GAAGCTGCTG
CAACCGGGCC TGCGCTTCGA CCCCATCGGC GACTTCACGC CCGTCAGCAA CCTGGCCTCG
TCGCCCACGG TGCTGGTGGT GCGTGCCGAT GCGCCCTGGC GCACGGCCCG GGAGCTGATC
GCGGGGCTGA AGGCCCAGCC GGCGCAGTCC AACTACGGCT CGGGCGGCAT AGGCACTTCG
GCCCATCTGG CGGGCGCCAC GCTGGCCTCG CTGGCGGGCC TGCAGGTCAC GCACATACCG
CTCAAGGGAT CGGTGGAGAT TGCGGCCTCG CTGATCCGCG GCGATACGCA GTATGCGTTT
CCGGTGGCGG GCACCGGCAT CCCCCAGGTG CAGGGCGGCA AGCTGCGGGC CCTGGCGGTG
ACCAGCCGCA AGCGCCTGGC GCAGCTGCCC GAGGTGCCCA CGCTGCAGGA GGTGCTGGGC
AGCGAGCTGG CGGTGCAGGA GTCCTGGTTC GGGCTGTGGG CTCCGGCCAG GACGCCCCCT
GCCGTGGTCG AGCGCCTGCA CGCCGCCGTG CGCCAGGCCG CCGCCCAGCC AGCGCTGCGC
GCCTCGTTCG AGGCTGTCGG CAACGAGGCC TTCGCTGATT TCGTGCGCAG CGAGAACCGC
AAGTGGGCCG CCATCATCGA GCTGGCCGGC ATCACCGCCA ACAGTTGA
 
Protein sequence
MDRRVFLAGS LAAAALPLVR ASDFPSRPVR VISPYAAGGG PDVQLRQAGP VLGEILGQSI 
VIENKVGAAG VLAAQYVAQQ PADGYTCLMG SNTHLIQKLL QPGLRFDPIG DFTPVSNLAS
SPTVLVVRAD APWRTARELI AGLKAQPAQS NYGSGGIGTS AHLAGATLAS LAGLQVTHIP
LKGSVEIAAS LIRGDTQYAF PVAGTGIPQV QGGKLRALAV TSRKRLAQLP EVPTLQEVLG
SELAVQESWF GLWAPARTPP AVVERLHAAV RQAAAQPALR ASFEAVGNEA FADFVRSENR
KWAAIIELAG ITANS