| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1176 |
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| Symbol | |
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| ID | 5746731 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 1311005 |
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| End bp | 1314613 |
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| Gene Length | 3609 bp |
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| Protein Length | 1202 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641296256 |
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| Product | hypothetical protein |
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| Protein accession | YP_001562206 |
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| Protein GI | 160896624 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01451] conserved repeat domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTTCA CGAGAAAGGG CTGGCTGGCG CGTGCGCTGC TGTCCGGCGG CTTGCTGGCA
ACAGCGGCTG CCGTGGCGGC GCCGGCCGAC ACCGACATCC TGGTCAACCA GGACGGTCTC
TATGACGGAC AGGACGCATC GGCAGGCCCT GCCGGCGGCA CCTTCACCTA TGTGGCCAAG
GTCAGGCACA ACAACATCGG TCCCGACGCC GTAGGCGTCA CCCTGACCGA GGTGCTGCCC
GTGGGCGCCG TGTTCCAGGG CTACAGCAGC AGCCCGGGCG GCATCTCCTG CACGGCACCC
GCAGCTGGTA CGGTGCTCAC CGCAGGCAAC AACACGCTGG TCTGCAACAT CGGCAACCTG
GCGCCCGCCG ATGGCTTCAA GTCCGTGGGC TTCGAGGTCA TCCTGCCGAC CGTCGGCACC
AACTGGCGCG CCGTGGCCAG CGCGCGCATG GCCTCGCCCG ACTACGACAA CGACCAGAAC
AACACGCAGC TGGACCGCAA CTTCACCACC ACCGAGGCCG CCGATCTGGC CATCGCGATA
GCGGCTCCCG CCAGCGTCGC CAACGGCGGC GCCTTCCAGT ACACCATCGA CGTGCAGAAC
AAGGGCCCGT CCGAGGTCCC CGCCGGTGGC CGTACCGTGG TGCGTTTCCC CGTGCCCAAC
GGCGCCGTGG TCACGGGCGT GCCCTCAGGC AGCGGCTGGA GCTGTACGCC CGCCTCGGGC
TATCCGCTGA TCTCGGGCGA GCTCAGCTGC ACGCGCGGCG GCCCGGTGCT GCCCGGCGCC
GTGCTGCCTT CCATCTCCGT GCCGGCCATC GCCAACATGA GCGGCACCAT TGCCGGCGCT
GCCAGCGTCA AGGGCTACAA GGACGCCAGC ACCGAGATGC CTGACGGCCA GTCCGGCAAC
AACACCGCCA GCGCCGCCGT GGTTTCCAGC GGCAGCGAGT TCGTGGATGT CTCGCTGCGC
AAGCAGGTGG CGCCCACGGT GCTGGATGCG CTGCAGGCGA CCGAGGTCAC CTACACGCTG
CAGCCGCGCC GCGAAGGCGG CTCCCTCGTG CCTCGTGACC TTACCGTCAC CGACACCCTG
CCGGCCGGCG TGACCTTCAC GGGCTTCGAC GGCAGCACGG CGCCCTGGAA CTGCGGCCAC
AACAGCGGCA CCATCACCTG CACCCATGCG GGCGAGTACC CGGTGGCCGG CTACGCCAAC
ATGCAGGCCA TCCGCTTCAA GGCCAGCGTG GCTGCGGGCG GAACGCCGGG TGCGCAACTG
GTCAACCAGG GCGTGATCGG GGTTCCACCC GAACTCAACG AGCCCAACAA GACCAACAAC
ACCGATAGCG CGGCGGTGAG CTTCAGCAAC GATGCGCGGC TGCGCCTCGT CAAGGCCGGC
CCCAGCCGCC CGGTACTGGC GGGTGAGGAG TTCCAGTACA CGATCACGGT GACCAACAAC
GGTCCCATGC CTGTGCTGCC GAATCAGCTG ATCACCGTAT CCGACACCCC TGCGGACAAC
CGAATGACCG TCATCGGCAT GTCCGGTGCG GGCACCGGCG CGGGTGACTG GACCTGCGCC
ACCCAGAGCT GCACCTCGAC CGCGGGCCTG GCCGTGGGCG CCAGCCGCCA GATCACGGTC
AGGGCCAAGG TCACGCTGGC CTCGGGCCAT CTGGACTTCA CCAACAACGC CTCGGCGGGC
GTGATCGGTC GGGACAATGC GTCGGCCACC ACCTCCGCGA CCGTCACCGT GTCTGCCGAC
AAGGTGGATG TGGGCATCGT CAAGAGCGTG GTCAGCCCTG TGCCGCCGGC CTCCATCAAG
AGCGGTGAAG AGGTCACCTA CCAGCTGGTG GTGAAGAACC ATTCGGCCAG CACCACGGTG
ACGAATGTCC GCGTGCGCGA TTCGCTGCAG TCCCTGGTCA AGCAGACCGA TGGTGTGCGC
ATCGTGGGCG TCGACCCGTT GGACGAGGCC GGCAATCCCG TGCCGTACAC GTACCCGGGC
GGCGGCTTTG TCTCCAGCCG CATCGTCTCC GGCGCCAACG CCAGCTGCGG CACCCCTTCG
GGCGGCGTCA ACAGCGAGAC GCGCGATCTG ACCTGCGACA TCACCTCCAT GGCTCCGGAG
GCCGAGGTGG TGATCGAGGT CAAGATCCGC CCCAAGCGCG CCACCACCGG CACCTATGCC
AACGCGGCCT CGGCCCAGTC CCTGGACATC CATGACGCCG ATCCCGGCAA CGATTCCTCT
ACGGCCAGCA TCACCGTGCA GGCCATCGCG GAAATCGCTG CGCAAAAGCA GGTCTCGCCC
AAGGTGGCGG CTGCGGGCGA GCCGCTGACC TATACGGTCA CGGTGCCCAA CTACGGCCCC
TCGTCGGCCG CCAATGTCAC GCTCAAGGAC GTGCTGCCTG CGGACGCCAT CTTCATCGGC
TCGCCCACGG TCACCGGCGG CGGCACCTGT ACTCCGGCTG CCACCGATGG CGTGCAGGGC
GGCACGCTGG AATGCGCCTG GACCAATCAG CTGGCTGCAG GCGCGCAGTA CACCGTGACC
TACAAGATGC GCTCGCGCGG CGATCTGGCG GCCGATACGG AGATCCTCAA CACGGTCGCC
GTGGACACCA CCACCGAGGA GCTGACCAAG GCCAACAACC AGGCCGAGGC CAAGGCCCGG
CTCAAGCGCG CCGAGCTGGA TGTGAACATC AGCATGCGCC ACACGGCGGA CGGCCTGGTG
CTGGGTGAGG ACACTGAATA CACCATCACG GTGACCAACT CCGGCCCCTC CTACGCCACC
CAGGTGGTCG TGACCGACAA GTTCCCCGCA TCGGGCTCCA CGGCCACCTT CAGCTACCAG
AACGGCCTGG CGCTGGCCGG CATTCCCGGC GCCTCCGCAT CCTGGTGCGG CGTGCAGCCG
GCGCTGAACG CGACCAGCGG GCCGCTGCAG TGCACCATCC CGGCGCTGGC TCCGGGCCAG
AGCATGACCA TCAAGTTCAA GATGCGCGCA CAGACCCTGC CCGACAAGGC ATCGGGCGGC
ACCATCTACC ACGAGGCCTC GGTCAAGCCC TTCGAGACGG AATGGCTGAG CAATGGCGGC
GATGTGATCG TCAACAACAC CACCACCGAC CGCACCTCCA CCAGCCGCCA GGGCAATGCC
GTGGACCTGG GGATCGGCAA GCAGGGCCCC GCCGGCCCGC TGGACGATGG CGACACGGCC
AGCTACACGC TGACCGTCAC CAACTACGGC CGTGATCCTC AGTCGCCCGC AGGCGGCTCG
GTGACCGACG TGCTGCCCGC CGGGCTGGAG TTCGTCTCGG CCTCGGCAGG CTGCAGCTAC
GCCAGCGGCA CGCGCACCGT GACCTGCAGC GTGCCGCAGC TGGCCCAGGG CGGCACGGCG
GTCTTCACGC TGGAGACAAA GCTGGACAAG CCCTACAAGG GCGCCCGCCC GCTGGTCAAC
TCGGCCACGG TCTCGGTACC CGGTGATGGC AATCCCGACA ACGACAAGAG CACGACCACC
ACGCCGCTCA AGCCGGGCCC GGACACCACG GCCAGCATTC CCACGCTGTC GCAGTGGGGC
CTGATGCTGA TGTCGTCCCT GCTGGCACTG ATGGCGCTGG GGGCCATGCG CAGGCGCGAG
CGTCGGTGA
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| Protein sequence | MAFTRKGWLA RALLSGGLLA TAAAVAAPAD TDILVNQDGL YDGQDASAGP AGGTFTYVAK
VRHNNIGPDA VGVTLTEVLP VGAVFQGYSS SPGGISCTAP AAGTVLTAGN NTLVCNIGNL
APADGFKSVG FEVILPTVGT NWRAVASARM ASPDYDNDQN NTQLDRNFTT TEAADLAIAI
AAPASVANGG AFQYTIDVQN KGPSEVPAGG RTVVRFPVPN GAVVTGVPSG SGWSCTPASG
YPLISGELSC TRGGPVLPGA VLPSISVPAI ANMSGTIAGA ASVKGYKDAS TEMPDGQSGN
NTASAAVVSS GSEFVDVSLR KQVAPTVLDA LQATEVTYTL QPRREGGSLV PRDLTVTDTL
PAGVTFTGFD GSTAPWNCGH NSGTITCTHA GEYPVAGYAN MQAIRFKASV AAGGTPGAQL
VNQGVIGVPP ELNEPNKTNN TDSAAVSFSN DARLRLVKAG PSRPVLAGEE FQYTITVTNN
GPMPVLPNQL ITVSDTPADN RMTVIGMSGA GTGAGDWTCA TQSCTSTAGL AVGASRQITV
RAKVTLASGH LDFTNNASAG VIGRDNASAT TSATVTVSAD KVDVGIVKSV VSPVPPASIK
SGEEVTYQLV VKNHSASTTV TNVRVRDSLQ SLVKQTDGVR IVGVDPLDEA GNPVPYTYPG
GGFVSSRIVS GANASCGTPS GGVNSETRDL TCDITSMAPE AEVVIEVKIR PKRATTGTYA
NAASAQSLDI HDADPGNDSS TASITVQAIA EIAAQKQVSP KVAAAGEPLT YTVTVPNYGP
SSAANVTLKD VLPADAIFIG SPTVTGGGTC TPAATDGVQG GTLECAWTNQ LAAGAQYTVT
YKMRSRGDLA ADTEILNTVA VDTTTEELTK ANNQAEAKAR LKRAELDVNI SMRHTADGLV
LGEDTEYTIT VTNSGPSYAT QVVVTDKFPA SGSTATFSYQ NGLALAGIPG ASASWCGVQP
ALNATSGPLQ CTIPALAPGQ SMTIKFKMRA QTLPDKASGG TIYHEASVKP FETEWLSNGG
DVIVNNTTTD RTSTSRQGNA VDLGIGKQGP AGPLDDGDTA SYTLTVTNYG RDPQSPAGGS
VTDVLPAGLE FVSASAGCSY ASGTRTVTCS VPQLAQGGTA VFTLETKLDK PYKGARPLVN
SATVSVPGDG NPDNDKSTTT TPLKPGPDTT ASIPTLSQWG LMLMSSLLAL MALGAMRRRE
RR
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