Gene Daci_1166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1166 
Symbol 
ID5746721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1296590 
End bp1297456 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content71% 
IMG OID641296246 
ProductIclR family transcriptional regulator 
Protein accessionYP_001562196 
Protein GI160896614 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTTGC GGCTTTGCGG CCGTGGTCCG CACAATCGCC ACGTGCCCCA TACCCCCATT 
GCCCACCAAC CCAGGGACTC GCAGGATGTC TGCCGCATCC GCGAGCAGGA CCCGTATTTC
GCGGGCACGC TGGCCAAGGG GCTGATGATT CTCCAGTGCT TCGTCAGCGA CCCGCGCCCG
CATGCCAACA GCGAGCTGGC CCGCCGCCTG GGCCTGCCGC GCCCCACCGT GTCCAGGCTG
TGCCGCAGCC TGCAGACCAT GGGCTACCTG GACCATGACG AGCGGCTGGA CCGGTACTTC
GTCGGCCCGG CCGCCGTCGC CCTGGGCTAC CCCTATGTGA TCAACACGCC CTTGCTCGGC
CCGCTGCGCC TGCCCATGCA GGCGCTGGCC GACCGTGTGA AGGGGGCGGT GTCGGTGGGC
GTGGTCATGG ACCTGGATGT GGTCTACCTG GATACCTGCG CCTGGGAGGG CGGCACGCTC
AAGCGACCCG GCGTGGGCGC CGTGCGCGGC GTGCTGGAAA CGGCCATGGG CCGGGCAGGG
CTGGCCCAGC TCGATGCCGG GGAACTTCAG CGCTTCCTGA ACCGCGTGCG CAGCCAGCGG
CCCGAGGAAT ATGCGCGCTG CAGGGACAAC GCCAGCGAAA GCCTGGCGCA CTATGCCGCC
CGGGGCTTCG CGGTCAACAT GGGGGACTCC GGCCTGGGCG TGTGCGCCGT GGGTGCGGCC
TCGCGCATCC GCTACGGGTC GCGCCGCCTG CTGTTCAACT GCGCCGTGCC GGGCCTGCGC
ATGCCGGCCC GCACGCTGAT CCGGGATGTG GGCCCCCAGT TGGCGCAGTT GGTGGCCCTG
TGCGACCGGC TGCCCGTGGA CCGCTGA
 
Protein sequence
MQLRLCGRGP HNRHVPHTPI AHQPRDSQDV CRIREQDPYF AGTLAKGLMI LQCFVSDPRP 
HANSELARRL GLPRPTVSRL CRSLQTMGYL DHDERLDRYF VGPAAVALGY PYVINTPLLG
PLRLPMQALA DRVKGAVSVG VVMDLDVVYL DTCAWEGGTL KRPGVGAVRG VLETAMGRAG
LAQLDAGELQ RFLNRVRSQR PEEYARCRDN ASESLAHYAA RGFAVNMGDS GLGVCAVGAA
SRIRYGSRRL LFNCAVPGLR MPARTLIRDV GPQLAQLVAL CDRLPVDR