| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1139 |
|---|
| Symbol | |
|---|
| ID | 5746694 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 1267932 |
|---|
| End bp | 1268774 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641296219 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001562169 |
|---|
| Protein GI | 160896587 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.573194 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTCCT CCACATCCCA CGGCGATGAC GACGCCTTCT TCGTCGAGTT CCGCGACGTC
TGGCTTGCCT ACAACGAGGA GCTGCTGCGC GCCAACCACT TCGCGGTCGA GGCCATCGAC
CTGCAGGTGC GGCGCGGCGA GTTCATCGCC ATCGTCGGCC CCTCGGGCTG CGGCAAGTCC
ACCTTCATGA AGCTGACCAC GGGGCTGAAG ATGCCCTCCA TGGGCCGCGT CATGGTCAAC
GGCGAGCGCG TGACCGGGCC GCTGAAGATC TCGGGCATGG CCTTCCAGGC GCCGTCGCTG
CTGCCCTGGC GCACCACGGT GGACAACGTG CTGCTGCCGC TGGAGATCGT GGAGCCGCAC
CGCTCGCTGT TCCGCCAAAA GCGCAAGGAG TACGAGGCGC GTGCGCGCGC CCTGCTGCAG
AAGGTGGGCC TGGGCGGCTA CGAGGACAAG TACCCCTGGC AGCTGTCGGG CGGCATGCAG
CAGCGCGCCA GCATCTGCCG CGCGCTGATC CACGAGCCCC AGATGCTGCT GCTGGACGAA
CCCTTCGGCG CGCTGGACGC CTTCACGCGC GAGGAGCTGT GGTGCGTGCT GCGCGACCTG
CAGGCCGAGC AGCGCTTCAA CGTCATCCTG GTCACGCACG ACCTGCGCGA GAGCGTCTTC
CTGGCCGACA CCGTGTATGT GATGAGCAAG AGCCCGGGCC GCTTCGTGGT GCGCCGCGAC
ATCGAGCTGC CGCGCCCGCG CGAGCTGGAG CTGACCTACA CGCGCGAATT CACCGACATC
GTGCACGAGC TGCGCGGCCA CATCGGCGCC ATGCGCAAGA CCGGCGCGGC CATCCAACAA
TAG
|
|---|
| Protein sequence | MNSSTSHGDD DAFFVEFRDV WLAYNEELLR ANHFAVEAID LQVRRGEFIA IVGPSGCGKS
TFMKLTTGLK MPSMGRVMVN GERVTGPLKI SGMAFQAPSL LPWRTTVDNV LLPLEIVEPH
RSLFRQKRKE YEARARALLQ KVGLGGYEDK YPWQLSGGMQ QRASICRALI HEPQMLLLDE
PFGALDAFTR EELWCVLRDL QAEQRFNVIL VTHDLRESVF LADTVYVMSK SPGRFVVRRD
IELPRPRELE LTYTREFTDI VHELRGHIGA MRKTGAAIQQ
|
|---|
| |