Gene Daci_1130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1130 
Symbol 
ID5746685 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1257488 
End bp1259671 
Gene Length2184 bp 
Protein Length727 aa 
Translation table11 
GC content70% 
IMG OID641296210 
Productmolybdopterin oxidoreductase 
Protein accessionYP_001562160 
Protein GI160896578 
COG category[C] Energy production and conversion 
COG ID[COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGACC GGCACCGCCC CTTGCCCGTG ACGGCCTTTT CCCGTTTTCC CGGCTTTTCA 
CGGTTTTTTC GCAAAGTACC CACCCTGTCC GAGACCGCTG CCACCATGTC CTCCGCCACG
CCCCCAGTCC AGGCCACCTC ACAGGTGCTG GGCGCCTGCC CCCATGACTG CCCCGATACC
TGCTCGCTGG TGACCACGGT CGAAGACGGC ATCGCCAAGA GAGTCCAGGG CAACCCCGCC
CATCCGCACA CGGGCGGCGT GCTCTGCGCC AAGGTCAGCA AATACACCGA GCGCAGCTAC
CACCCCGAGC GTGTGCTCAC CCCGCTGCGC CGCGTGGGAC CCAAGGGTTC CGGGCAGTTC
GAGCCCGTGG GCTGGGACGA GGCGCTGGCC GACATCGCCG CGCGCCTGCA GTCCCTGGCG
GCGCGCGATC CCGAAACCAT CCTGCCCTAC AGCTACGCAG GCACCATGGG CCTGGTGCAG
GGCGAGAGCA TGGACCGGCG CTTCTTCCAC CAGCTCGGCG CCTCGCTGCT GGACCGCACC
ATCTGCTCCA GCGCCGGGGG CGAGGCCCTG AACCTGACCT ATGGCGGCAA GCTGGGCATG
CGCGTGGAGC ATTTCACCGA AAGCCGGCTC ATCCTCATCT GGGGCAGCAA CAGCATCGGC
AGCAGCCTGC ATTTCTGGCG CTATGCGCTG GAGGCCAAGC GCAACGGCGC ACGCCTGGTG
TGCATAGACC CGCGCAAGAC CGAGACCGCC GACAAATGCC ACGAGCACCT GCAGCTGCTG
CCCGGCACCG ATGCCGCCCT GGCACTGGCC CTGATGCACG AGCTGATCAC GCACGGCTGG
CTGGACCATG ACTACATTGC GCGCCACACG CTGGGCTGGG AGGAACTCAA GGCCCGCGCC
CTGCAGTGGC CGCCCGAGCG CGCGGCCCAG GTCTGCGGCC TGCCCGTGGA GCAGATCCGC
CAGCTGGAGC GCGACTACGG CACCACCACG CCCGCCGCCA TCCGCCTGAA CTACGGCGTG
CAGCGCGCGC GCGGCGGCGG CAATGCCGTG CGCGCCATCG CCTGCCTGCC GGCCCTGGTG
GGCGCCTGGC GCCACCGTGC GGGCGGCCTG CTGCTGTCCG CCTCGGGCGC CCTGCCCGCG
CAGCGCGCCC GACTGCAGAT GCCGCACCTG CTGGGCGAGC GCCGCCCGCG CACCATCAAC
ATGAGCACCA TCGGCGACGC CTTGCTGCAC GAAGGCGGCA ACGGCTTCGG CCCGCGCGTG
GACGCCATCG TGGTCTACAA CAGCAATCCC GTGGCCGTGG CGCCCGAGTC GGCCAAGGTC
GTGGCCGGCT TTGCGCGCGA GAACCTGTTC ACCGTGGTGC TGGAGCAGTT CATGACCGAC
ACGGCCGACC TGGCCGACTA CGTGCTGCCG GCCACCACGC AGATCGAGCA CTGGGACATC
CACGGCAGCT ACGGCCATAC CGACGTGCTG CTCAACCGCC CCGCCATCGC GCCGCTGGGC
CAGGCGCGCA GCAATGGCCA GATCTTCCGC GACCTGGCCG CGCACATGGC GCGGCATGAC
GACGCCTTTG CCGCCGCCCA TTTCCAGACG GGAGACGAGC AACTGTGCCG CGAAGCCTTC
GAAGGGCGCG GCGTGGACTT CAACGAGCTG CTGGACAAGG GCTTTGCCAC CCTGGCCCTG
CCCGAGGCCC CCTTTGCCGA GGGCGGCTTC GCCACGCCCT CGGGCCGCTG CGAATTCACC
AGCGCCGAGC TGGCGCGGCG CGGCATGGAC CCGCTGCCCG ACTACCTGCC CAACTACGAA
ACCGCCGAAA CGGATGCGCG CTACCCGCTG GCCATGATCT CGCCGCCGGC ACGCAACTTT
CTCAACAGCA GCTTCGTCAA CGTCAAGAGC CTGCGCACCA TGGAAGGCCG ACCGCTGGTG
GAACTGCACC CCGACGACGC CGCCCCGCGC GGCGTGGCCG AGGGCGACCG CGTGCGCGTC
TTCAACGACC GGGGCAGCTA CGAATGCCAC GCCACCCTCA ACGGCCGCGC GCGCCGGGGC
GTGGTCAACG GCCTGGGCAT CTGGTGGCGC AAGCATGGCG ACAACGGCAC CAACGTCAAC
GAGCTCACCC ACCAGCGCCT GACCGACCTG GGCCGCGCGC CCAGCTTCTA CGACTGCGCG
GTGCAGGTGC AGCGGCTGGC CTGA
 
Protein sequence
MQDRHRPLPV TAFSRFPGFS RFFRKVPTLS ETAATMSSAT PPVQATSQVL GACPHDCPDT 
CSLVTTVEDG IAKRVQGNPA HPHTGGVLCA KVSKYTERSY HPERVLTPLR RVGPKGSGQF
EPVGWDEALA DIAARLQSLA ARDPETILPY SYAGTMGLVQ GESMDRRFFH QLGASLLDRT
ICSSAGGEAL NLTYGGKLGM RVEHFTESRL ILIWGSNSIG SSLHFWRYAL EAKRNGARLV
CIDPRKTETA DKCHEHLQLL PGTDAALALA LMHELITHGW LDHDYIARHT LGWEELKARA
LQWPPERAAQ VCGLPVEQIR QLERDYGTTT PAAIRLNYGV QRARGGGNAV RAIACLPALV
GAWRHRAGGL LLSASGALPA QRARLQMPHL LGERRPRTIN MSTIGDALLH EGGNGFGPRV
DAIVVYNSNP VAVAPESAKV VAGFARENLF TVVLEQFMTD TADLADYVLP ATTQIEHWDI
HGSYGHTDVL LNRPAIAPLG QARSNGQIFR DLAAHMARHD DAFAAAHFQT GDEQLCREAF
EGRGVDFNEL LDKGFATLAL PEAPFAEGGF ATPSGRCEFT SAELARRGMD PLPDYLPNYE
TAETDARYPL AMISPPARNF LNSSFVNVKS LRTMEGRPLV ELHPDDAAPR GVAEGDRVRV
FNDRGSYECH ATLNGRARRG VVNGLGIWWR KHGDNGTNVN ELTHQRLTDL GRAPSFYDCA
VQVQRLA