Gene Daci_1104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1104 
Symbol 
ID5746659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1222809 
End bp1223684 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content74% 
IMG OID641296184 
Producthypothetical protein 
Protein accessionYP_001562134 
Protein GI160896552 
COG category[S] Function unknown 
COG ID[COG3016] Uncharacterized iron-regulated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGTCC GCTCCCACCT CCGCCCCTTC ATCCGCACCC CGCGCCTTGC CGGCCTGGCT 
GCGGCCGCAT TGCTGGCGGC AGCCCTTGCC GGCTGCGCCA GCTCCTCCGC CCCGGCGCGG
GACTGGACAC AGCAGCTGCA GCGCTGGTCC GACGCGCCCA TCGTGCTGCT GGGCGAGCAG
CACGATGCGG TCGCCCACCA GGCCTGGCAG CAGGCCACGG TGGAGCAGTT GGCAAAACAG
GAGCGCCTGG CCGCGCTGGT GATCGAGATG GCGCCGCGCA CGGGCTCCAC GGCCAGCCTG
GCGCGCGATG CCTCCGAGGA CGCGGTGCAG CAGGCCCTGC AATGGCAGGA CGCGGCCTGG
CCCTGGCCGC GCTACCGCGG CGTGGTCATG GCCGCCGTGC GCGCGGGCGT GCCCGTGCTG
GGCGGCAACC TGCCGCGCGC CGACATGAAG CAGGCCATGC GCAACGAGAA CCTGGACACC
CACCTGCCGC CCGAGGGCTG GCAGCGCCAG CTCGACGCCA TCCGCGAAGG CCACTGCGGC
CTGCTGCCCG ACACCCAGCT GGCGCCCATG GCCCGCATCC AGCTGGCCCG CGATGCCAGC
ATGGCCGAGG TGGCCAGGGC CGCAGTCAGG CCCGGCAAGA CCGTGCTGCT GGTGGCCGGG
CGCGGCCACG TGCTGCGCGG CGTGGGCATT CCCAGCTGGC TGCCCGAGGC CGCAGGCGCC
AAAGTGGCCG TGGCGCAGGC GGGGGAGACA TCGGTGGCGC AGGCCTCGGA TGTGGATTGG
CTGCAGAAGA CGGATGCCCT GCCCGCCAAG GACCACTGCG CCGAGCTGCG GGAGAAGTTC
AGGAATCCGC CGGCGCCGCG GGCCGATGCG GGCTGA
 
Protein sequence
MQVRSHLRPF IRTPRLAGLA AAALLAAALA GCASSSAPAR DWTQQLQRWS DAPIVLLGEQ 
HDAVAHQAWQ QATVEQLAKQ ERLAALVIEM APRTGSTASL ARDASEDAVQ QALQWQDAAW
PWPRYRGVVM AAVRAGVPVL GGNLPRADMK QAMRNENLDT HLPPEGWQRQ LDAIREGHCG
LLPDTQLAPM ARIQLARDAS MAEVARAAVR PGKTVLLVAG RGHVLRGVGI PSWLPEAAGA
KVAVAQAGET SVAQASDVDW LQKTDALPAK DHCAELREKF RNPPAPRADA G