| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1073 |
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| Symbol | |
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| ID | 5746628 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 1184052 |
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| End bp | 1187345 |
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| Gene Length | 3294 bp |
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| Protein Length | 1097 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641296153 |
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| Product | carbamoyl-phosphate synthase L chain ATP-binding |
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| Protein accession | YP_001562103 |
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| Protein GI | 160896521 |
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| COG category | [C] Energy production and conversion
[I] Lipid transport and metabolism |
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| COG ID | [COG1038] Pyruvate carboxylase
[COG4799] Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.398596 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCCAGA AGATCCTGAT TGCCAACCGC GGCGAGATCG CGCTGCGCAT CGTGCGCGCG
CTGCGCGAGC TGGGTGTGCC GAGCCTGGCC GTCTTTGCCG CAGACGATGC GCAGGCGCCC
CATGTATCCG CTGCCGATGC AGCCGTGCCC CTGGGCGCCA GCGGCCCCTC GGCCTACCTG
GACGGCGCCC ACCTGCTGCG CATTGCGCGC GAGCACGGCT GCGACGGCAT CCATCCGGGC
TACGGCTTTC TCAGCGAGAA CGCGGGCTTT GCCCAGGCCT GTGCCGATGC GGGCCTGCGC
TTCATCGGCC CCGCGCCGGA GCACCTGGCG CTGCTGGGCG ACAAGGCCCG CGCACGCGAT
CTGGCGCGCC GCTGCGGCGT GCCGCTGATG CCGGGCAGCA GCGAGGCTGT CACGCTGGAA
CAGGCCCAGG CCTTCTTCGA GGCGCAGCAG GCCGGGGGCG CCAGCGGCAT CATGGTCAAG
GCCATCGGCG GCGGCGGCGG GCGCGGCATG CGTGCCGTGG CGCGCGCCGA GGACCTGCCT
GCCGCCTATG AGCGCTGCCG CAGCGAGGCG CGCGCCGCCT TCGGCGTGGA CGGCGTCTAT
GTGGAGCGGC TGATGACGGG CGCACGCCAT ATCGAGGTGC AGATCCTGGG CGACGGCGGC
GCAGGCCCCA TCGCGCTGGG CGAGCGTGAA TGCACGCTGC AGCGGCGCTT CCAGAAGCTG
GTCGAGATCG CGCCCAGCCC CAGCTTGGCG CAGCCGCTGC GCGAGCGCAT CACGCGCGAC
GCGCTGCGCA TGGCCGCCGA GATCGGCTAC GAGAGCCTGG GCACCTTCGA ATTCCTGGTC
GATGCGGTCT CCGACTCCCT GCCCTATGTC TTCATCGAGG CCAACCCGCG CCTGCAGGTG
GAGCACACCA TCACCGAGGA GGTCTTCGGC ATCGACCTCG TGCAGGCCCA GATCCGCGTG
GCGGCCGGCG ATCACCTTGG AGAGCTGGGC CTGGATGCCA GGACGCCGCC CGCGCCGCGC
GGCTATGCCA TGCAGTGGCG CATCAATGCC GAGACGCTGG ATGCCGCAGG CCAGTCGCGC
CCCGGCAGCG GGCGCATAGG CGCACTGCAG TGGCCGGCCG GGCCCGGCAT CCGCATCGAC
ACGCATGCGG TGGCGGGCGC CAGCCCCTCG CCGCACTACG ACACGCTGCT GGCCAAGCTC
ATCGTGCACA GCAGCGGGCC GCGCTTTGAA GACGTGCTTC GCCGCGCACG TCGCGCACTG
GACGAATGCC GCATCGACGG GCTGGCCACC AACCTGCCGC TGCTGCAGGC GCTGGCCCGG
CGGCCCGAGA TGGCATCGCA GGCCGTGCAC ACACGCTGGC TTGAAGAGGC CCTTCCCGAG
TTGGTGGCGG ACGCCCAGGC GCTGGCCGAA GGCGCGCGCC ACACGGATGC GGCCGCCGAG
GTTCCGGCGG CGGCCGAGGC TGCTGGCGCG CCCGTCCCCC AAGGCGCCCT CACGGCCCCC
ATGCCCGCGC GCATCGTGCA GTGGAGCGTG GCCGTGGGCG ATTCCGTGGC CGCAGGCGCC
GAGCTGGGCG TGCTCGAAGC CATGAAGATG GAGCATGTGC TGCTGGCGCC GCAGGCCGGC
ACCATCACCC GACTGCTGGC CGAGGCCGGT GCCTATGTGG CCCAGGACCA GCCCCTGCTG
GTGCTGGCCG CCGCCGAAGG CGTGCAGGCC GACGCACGCG CGCAGCAGTC CGCACAGGAC
CCGGACCACA TCCGCGCCGA CCTGCAGCGC GTCATCGACC GCCATGCCTT CACGCGCGAT
GCTGCCCGGC CCGAGGCCAT GGCCAAGCGC CATGCCCAGG GCAGCCGCAG CGCGCGCGAG
AACATCGCCG ACCTCTGCGA TGAGGGCAGC TTCATCGAAT ACGGTGCGCT GGCCATTGCC
GCGCAGACGC GCCGGCGCAG CATGGACGAC CTGATCGCCA ACACGCCGGC CGACGGCATG
GTCACGGGCA TGGGCTCCAT CAACGGCGCG CAGTTCGGCC AGGAGCGCTC GCGCGCCGTC
GTCATGTCCT ATGACGCCAC CGTGCTGGCG GGCACCCAGG GCGCGCGCAA CCATGCCAAG
ACCGACCGCA TGCTGGGCAT TGCGCTGGCC CAGAAGCTGC CCGTGGTGCT GTTCGCCGAA
GGCGGCGGCG GGCGGCCCGG TGACACCGAC ACGCCCGTGG TCGCGGGCCT GCATGTGCAC
ACCTTCGCGG CCTATGCGGC CCTGTCGGGC CAGGTGCCCG TGATCGGCAT CACCCATGGC
CGCTGCTTCG CGGGCAACGC GGCCCTGCTG GGCTGCAGCG ACGTGATCAT CGCCACGCGC
GCCAGCTGCA TCGGCATGGG CGGGCCGGCC ATGATCGAGG GCGGCGGGCT GGGCGTCTTC
CGGCCCGAAC AGATCGGGCC CAGCAGCGTG CAGCATGCCA ATGGCGTGAT CGACGTGCTG
GTCGAGGACG AGGCCGAAGC CGTGGCCGCC GCGCGCCACT ACCTGTCCTT CTTCCAGGGC
CGCACCACGG AGTGGACCGC GCCCGACACG CGCGCCCTGC GCCATGTGGT GCCCGAGAAC
CGGCTGCGTG CCTATGACAC GCGTGCGGCC ATGGCGCATC TGGTGGACGA AGGCAGCCTG
CTGATGCTGC GCACGGGCTT TGGCGCAGGC ATCCACACGG CGCTGGCGCG CATCGAAGGC
CGGCCCGTGG GGCTGATGGC CAACAACCCC TCCCACCTGG GCGGCGCCAT CGACGCCGAT
GCGGCCGACA AGGCCGCGCG CTTCATGCAA CTGTGCAATG CCCATGGCCT GCCCATCGTG
AGCCTGGTGG ACACGCCCGG CTTCATGGTC GGCCCCGAGA TCGAGAAGAC CGCCCAGGTA
CGCCATGTCA GCCGCCTGTT CGTCACGGCG GCCAAGCTGC GCGTGCCGTA TTTCAGCGTG
GTGCTGCGCA AGGGCTACGG CCTGGGGGCC ATGGGCATGA CGGCCGGCAG CTTCCATGCG
CCGGTGTTCA ACGTGGCCTG GCCCACGGGC GAGTTCGGCG CCATGGGTCT GGAAGGCGCC
GTGCGCCTGG GCTTTCGCAA GGAACTGGAG GCCCTGCCCG AGGGCGCCGA ACGCAACGCC
CTGTTCGACC GGCTGCTGGC CCAGCAGTAC GCCCACGGCG AGGCCATGCA CATGGCCGGC
ACGCTGGAGA TCGATGCCGT CATCGACCCC GCCGACACGC GCGCCTGGCT GTCGCGCGGC
CTGGCAGGGG CGCGCGTTGC GCCTGCCCAA GCCGGCTTCG TGGACACCTG GTAG
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| Protein sequence | MFQKILIANR GEIALRIVRA LRELGVPSLA VFAADDAQAP HVSAADAAVP LGASGPSAYL
DGAHLLRIAR EHGCDGIHPG YGFLSENAGF AQACADAGLR FIGPAPEHLA LLGDKARARD
LARRCGVPLM PGSSEAVTLE QAQAFFEAQQ AGGASGIMVK AIGGGGGRGM RAVARAEDLP
AAYERCRSEA RAAFGVDGVY VERLMTGARH IEVQILGDGG AGPIALGERE CTLQRRFQKL
VEIAPSPSLA QPLRERITRD ALRMAAEIGY ESLGTFEFLV DAVSDSLPYV FIEANPRLQV
EHTITEEVFG IDLVQAQIRV AAGDHLGELG LDARTPPAPR GYAMQWRINA ETLDAAGQSR
PGSGRIGALQ WPAGPGIRID THAVAGASPS PHYDTLLAKL IVHSSGPRFE DVLRRARRAL
DECRIDGLAT NLPLLQALAR RPEMASQAVH TRWLEEALPE LVADAQALAE GARHTDAAAE
VPAAAEAAGA PVPQGALTAP MPARIVQWSV AVGDSVAAGA ELGVLEAMKM EHVLLAPQAG
TITRLLAEAG AYVAQDQPLL VLAAAEGVQA DARAQQSAQD PDHIRADLQR VIDRHAFTRD
AARPEAMAKR HAQGSRSARE NIADLCDEGS FIEYGALAIA AQTRRRSMDD LIANTPADGM
VTGMGSINGA QFGQERSRAV VMSYDATVLA GTQGARNHAK TDRMLGIALA QKLPVVLFAE
GGGGRPGDTD TPVVAGLHVH TFAAYAALSG QVPVIGITHG RCFAGNAALL GCSDVIIATR
ASCIGMGGPA MIEGGGLGVF RPEQIGPSSV QHANGVIDVL VEDEAEAVAA ARHYLSFFQG
RTTEWTAPDT RALRHVVPEN RLRAYDTRAA MAHLVDEGSL LMLRTGFGAG IHTALARIEG
RPVGLMANNP SHLGGAIDAD AADKAARFMQ LCNAHGLPIV SLVDTPGFMV GPEIEKTAQV
RHVSRLFVTA AKLRVPYFSV VLRKGYGLGA MGMTAGSFHA PVFNVAWPTG EFGAMGLEGA
VRLGFRKELE ALPEGAERNA LFDRLLAQQY AHGEAMHMAG TLEIDAVIDP ADTRAWLSRG
LAGARVAPAQ AGFVDTW
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