| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1067 |
|---|
| Symbol | |
|---|
| ID | 5746622 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 1177606 |
|---|
| End bp | 1178238 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641296147 |
|---|
| Product | cyclic nucleotide-binding protein |
|---|
| Protein accession | YP_001562097 |
|---|
| Protein GI | 160896515 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.314176 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGCA TTTTCCGCAA GCTGCGAAGC GGCCAGGAGC CTTCGGCCCC GGCCTCCGAG
TCGGCCTTCT TCACGACCAC GCTGGCGGCG CATGGCTTCA TGGACCCGCA CACTCCTCCC
GTTCCCTGGG AGGCGCGCGC CATCGAGGTA GGGGCCACGC GGCTGCCGCG CGGCGGCGGG
GGCCAGCTGG AGCAGCTGTG GTCGCGCGAC CGCTACCTGG GCCAGCTGGA TGCGGCCAGC
CTGCAGCGGC TCAGTGAATA CTTCATCTAC GCGGCCGTGG CACCGCAACG CGACGTGATC
CGCCAGGAAG AGAACGGAAG CTTCATGGCC GTGGTGCTGT CCGGCCAGAT CGCCGTGGAG
CGCCAGCAGC CCTGGGGCGA GCGCATGCGC CTGGCGCAGA CGCGGCCCGG CGACATCCTG
GGCGAGATGT CCCTGCTGGA CGGCGGGCCG CGCTTTTCCA GCTGCACCAC GCTGACCGAC
TGCGAGATCG GCGTGCTCAG CGCCGAGGCG CTGGACGAGA TGATGGCCAA GGACGCCGCG
CTGGCCGCCA AGCTGATGGC GCTGCTGGCG CGCAAGCTCT CGTTCCGGCT GCGCGCCATC
AGCGTGCGCC TGGGCGAAGA GCAGCACACA TAG
|
|---|
| Protein sequence | MKSIFRKLRS GQEPSAPASE SAFFTTTLAA HGFMDPHTPP VPWEARAIEV GATRLPRGGG
GQLEQLWSRD RYLGQLDAAS LQRLSEYFIY AAVAPQRDVI RQEENGSFMA VVLSGQIAVE
RQQPWGERMR LAQTRPGDIL GEMSLLDGGP RFSSCTTLTD CEIGVLSAEA LDEMMAKDAA
LAAKLMALLA RKLSFRLRAI SVRLGEEQHT
|
|---|
| |