Gene Daci_0972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0972 
Symbol 
ID5746526 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1083219 
End bp1083614 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content72% 
IMG OID641296052 
Productendoribonuclease L-PSP 
Protein accessionYP_001562003 
Protein GI160896421 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID[TIGR00004] endoribonuclease L-PSP, putative 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGGTG AAAACGGGAT CGATCTGCGC CATGCATCGC CGAACCTGCC TGCGCCGGGC 
GGCCACTACA GCCACACGGC CACGGGCCAG GGGCTGGTCT TCGTGTCAGG GCAGCTGCCC
ATACGGCCCG ACGGCACGCG CCTGGTGGAT GCCGGTTTCG AGGACCAGGC CCGGCAGGCG
CTGGCCAACC TGGCAGCGGC GCTGGAGCTG GCCGGCAGCG GCGTGCCACG GCTGCTGCAG
GTGCGCGTGT ACCTGGACGA CATGGCGCAC TGGCCGGCCT TCGACCGCAT CTACGCGGAC
TGGGCCGGCA CGCACCGGCC CGCGCGCGCC GTGGTGCCCA CGGGGGCGCT GCATTTCGGG
TTGAAGGTGG AGATCGAGGC CGTGGCGCTG GCCTGA
 
Protein sequence
MAGENGIDLR HASPNLPAPG GHYSHTATGQ GLVFVSGQLP IRPDGTRLVD AGFEDQARQA 
LANLAAALEL AGSGVPRLLQ VRVYLDDMAH WPAFDRIYAD WAGTHRPARA VVPTGALHFG
LKVEIEAVAL A