| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0966 |
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| Symbol | |
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| ID | 5746520 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 1076929 |
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| End bp | 1077996 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641296046 |
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| Product | porin |
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| Protein accession | YP_001561997 |
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| Protein GI | 160896415 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCA TCCATACGCC CATGCTGGGC GTGGCGCTAG CCTGCCTGGC GTCCTTGCCC
GGGGCCGCTT CGGCGCAGTC CAAGGTCGAG ATCTTCGGCG TCGTCGATGT CGGCGTCACG
CACCTGAACG GCTCCGGCCC CTCCAAGACC GGCCTGTCCA CGGGCGGCGC CAACATCAGC
CGCATCGGCT TTCGCGGCAC GGAAGAGCTG GGCGGCGGCC TGCGCGCTGG CTTCTGGCTG
GAGGCGGGCA TGGACGTGGA CAGCGGCTCG GGCAAGGCCA GCGGTGGCGG CCTGAGCTTC
AACCGCCGCT CCACCGTGAG CCTGTCGGGC GACTTCGGCG AAGTGCGCCT GGGCCGCGAT
GACTCGGCCA CCTTCCTGAG CACGCTGATC TTCGACCCCT TCCTCACCAA CGGCGTGGGC
GGCACCATGG GCTTCACCAT GCTGGGCATT CCCGGCACGG GCACGGCCAC GGGCGGCGCG
CCCATCCAGA TCAGCAACGC GGTCAGCTAC TTCCTGCCGC AGAACCTGGG CGGCTTCTAC
GGCCAGGTGC AGGTGGCCAT GGGCGAGCAG GCGCGCAGCG CACCCAACAA GAACCAGGGC
GACTACCGCG GCCTGCGCTT CGGCTACCGC CAGGGCCCCT TCAACGGCGC GCTGGCCACG
GGCAAGTTCT ATGGCGACAG CGATGCGACC AACCTCACGG CCAGCAACGT GGGCCTGAGC
TGGGACTTCG GCGTGGCCAA GCCCATGCTG CTGTGGGCCA GCGAAAAGCG CGGCGCCCTC
AAGGTCACCG CCCTGCAGCT GGGCGTGACC GCGCCCGTGG GCATGGGCGA GTTCAAGGCT
TCCTACGGCC ACTACAACAC CGACGGCAGC AATGCCGACT GGAACAAGAT CAGTGTGGGC
TACGGGCACA ACCTGTCCAA GCGCACCCAG GTCTACGGCA CGGTGGCCTT CCTCAAGAAC
AAGGACGGCG CGGCCAAGTC CATCGGCGTG CAGGGCCTGT CGGCCCCGGG CACCACGCTG
GGTGGCCGCT CCTCCGGCTT CGAGGTGGGC GTGCGCCACT TCTTCTGA
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| Protein sequence | MKTIHTPMLG VALACLASLP GAASAQSKVE IFGVVDVGVT HLNGSGPSKT GLSTGGANIS
RIGFRGTEEL GGGLRAGFWL EAGMDVDSGS GKASGGGLSF NRRSTVSLSG DFGEVRLGRD
DSATFLSTLI FDPFLTNGVG GTMGFTMLGI PGTGTATGGA PIQISNAVSY FLPQNLGGFY
GQVQVAMGEQ ARSAPNKNQG DYRGLRFGYR QGPFNGALAT GKFYGDSDAT NLTASNVGLS
WDFGVAKPML LWASEKRGAL KVTALQLGVT APVGMGEFKA SYGHYNTDGS NADWNKISVG
YGHNLSKRTQ VYGTVAFLKN KDGAAKSIGV QGLSAPGTTL GGRSSGFEVG VRHFF
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