Gene Daci_0949 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0949 
Symbol 
ID5746503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1059964 
End bp1060494 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content62% 
IMG OID641296029 
Productcupin 2 domain-containing protein 
Protein accessionYP_001561980 
Protein GI160896398 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAAT CCGCTCAGAA CACGCCCCGC ACCTGGGACC AGCCCGAAGG CTCCAGCTTC 
GAACAATGGA TGGAGTCGCG CGTGGCGCGA TTTTCCACGC GCAAGTACGA CTTCGATGCG
CTGAAGTTCC AGGCCGACTT CGACCCCAAG TACCGCCGTG GCCAGATGCG CTACATCGGC
ACGGGCGGCA CGGGCGTGGC TGCGGACAGC AACACCATCC CTTCCGAGAA CTTCACCTTC
TCCACCATGG TCATCCCGGC CGGCAATGAA GGCCCCTCGC ACCTGCACAC CGATGTGGAG
GAAGTCTTCT TCCTGATCCG CGGCAAGCTC AAGCTCGTGC TGGAGAAGGA CGGCCAGCGC
TTCGAGACCA TCCTCACCGA CCGCGACGTG GTCTCTGTGC CGCCCGGCGT GTACCGCGAA
GAGATCAACA TCGGCGACGA AGACGCGCTG ATGTGCGTGA TGCTGGGCGC CAAGAAGCCC
ATCACGCCCA CCTATCCCCC AGAACACCCC CTGGCAAAAA TCAAACGTTG A
 
Protein sequence
MSESAQNTPR TWDQPEGSSF EQWMESRVAR FSTRKYDFDA LKFQADFDPK YRRGQMRYIG 
TGGTGVAADS NTIPSENFTF STMVIPAGNE GPSHLHTDVE EVFFLIRGKL KLVLEKDGQR
FETILTDRDV VSVPPGVYRE EINIGDEDAL MCVMLGAKKP ITPTYPPEHP LAKIKR