Gene Daci_0942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0942 
Symbol 
ID5746496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1053119 
End bp1054093 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content71% 
IMG OID641296022 
Producthypothetical protein 
Protein accessionYP_001561973 
Protein GI160896391 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCT CTCACCCTTC TCCCGTCACC CGCCGCGTTC TGCTGGCAGC AGCCCTGGCC 
CTGGGACTGG CACCGGCCGT GCATGCCGAA CGCGTGATCC GCATCGTCGT GCCCTTCGGC
GCGGGCGCCA CGCAGGACAC GGTGGCACGC ACCTTCAGCA ATGAACTGGG CCAGGCCCTG
GGCGCCACCG TGGTGGTGGA AAACCGGGCG GGCGCGGGTG GCAGCGTGGG CACGGCCCAG
GTGGCCAAGT CCGCGCCGGA CGGCAGCACC CTGGTGCTGG CTGCGGCCAG CCACAACCTG
GCCGGCCATC TGTACGCGAA GCTGCCCTAT GACCCGCTCA AGGACTTCGT GGGCGTGTCT
TTCCTGGGCC GCACGGGCTA TGTGGTGGGC GTGCCGGCCG CCTCGGGCGT GCAGACCCTG
GGCGAGCTGC TGCAGCGCGC CAGGGCCCAG CCCGGCCAGC TCAACTATGC GTCGGCCGGC
AATGGCAGCG CCTCGCACCT GGCCTCGGCC TCGCTGGCCG CGCAGGCGGG CGTCAAGCTG
CAGCACATCC CCATGAAATC CACGGGCGAC GCCACGACCG AACTGCTGGC CGGCCGCGTG
CAGCTGGTCA CGGGCGCCAC CATCGGCATG CTGGCCTTCC AGAAGGACCC GCGCGTCAAA
CTGCTGGCCT ACTCGGGCCA GCAACGGTCG CGCTTCCTGC CTGACTTGCC CACGGTGGCC
GAGTCCGGCG TGCCCGGCTA TGCCTTCGAC TCCTGGCTGG GCCTGCTGGC ACCGGCCGGC
ACGCCGCCCG TCGAAGTGGA GCGCATCAAC GCCGCCGTGC GCAAGGTGCT GGCCGAGCCC
GTGGTCCAGG AGCGCCTGGC CCGCGTGGGC GTGGAAGCCG CCACCCTGCC GGCCGCCGAA
TTCCAGCGCC TGCTCAAGGA CGACTGGGAA GCGTCCGGGC GCATCGTCAA GGCGGCCGAC
GTGCGCATCG AATAG
 
Protein sequence
MKTSHPSPVT RRVLLAAALA LGLAPAVHAE RVIRIVVPFG AGATQDTVAR TFSNELGQAL 
GATVVVENRA GAGGSVGTAQ VAKSAPDGST LVLAAASHNL AGHLYAKLPY DPLKDFVGVS
FLGRTGYVVG VPAASGVQTL GELLQRARAQ PGQLNYASAG NGSASHLASA SLAAQAGVKL
QHIPMKSTGD ATTELLAGRV QLVTGATIGM LAFQKDPRVK LLAYSGQQRS RFLPDLPTVA
ESGVPGYAFD SWLGLLAPAG TPPVEVERIN AAVRKVLAEP VVQERLARVG VEAATLPAAE
FQRLLKDDWE ASGRIVKAAD VRIE