Gene Daci_0909 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0909 
Symbol 
ID5746463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1021575 
End bp1022027 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content69% 
IMG OID641295989 
Productcarboxymuconolactone decarboxylase 
Protein accessionYP_001561940 
Protein GI160896358 
COG category[S] Function unknown 
COG ID[COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAT CTTCCGCCAA CGCCCTGCAG CGCGGCCTTG CCAACCGCCG CCGCGTGCTG 
GGCGATGAAT GGGTGGACCA ATCCGTGGCG CGCGCCAACG AACTGAATGT GGAGTTCCAG
CGCATGATCA CGGCCTACGC CTGGGACGGC ATCTGGAGCC GCCCTGGCCT GGAGCGCCGC
ACGCGCCGCA TCATGGTGCT GGCCATCACG GCCTCCATGG GCCGCTGGGA AGAGTTCGAG
CTGCACATCC GCACGGGCCT GCTGGCCGAC CCGGCCGATG CCGAGGCCGC GCCGCTGGAC
CTGGACACCA TCCGCGAAGT GCTGCTGCAG ACCGCCGTCT ATGCCGGCGT GCCCGCAGGC
AACACCGGCA TGGCCATCAC GCTGAAGATC CTCAAGGAGC TGGGGCGCAC GCCCGCGCCG
GCCAGCTTTC ATCCGCCCGC AGACACGGCC TGA
 
Protein sequence
MTESSANALQ RGLANRRRVL GDEWVDQSVA RANELNVEFQ RMITAYAWDG IWSRPGLERR 
TRRIMVLAIT ASMGRWEEFE LHIRTGLLAD PADAEAAPLD LDTIREVLLQ TAVYAGVPAG
NTGMAITLKI LKELGRTPAP ASFHPPADTA