Gene Daci_0879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0879 
Symbol 
ID5746433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp986142 
End bp987110 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content65% 
IMG OID641295959 
Producthypothetical protein 
Protein accessionYP_001561910 
Protein GI160896328 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.381567 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGAC GTCATTTCCT TGCTTCCATC GCCGCTTCTT CTGTCGTTCC TGGAATGTCC 
TTCGCCCAGG ACACCTCCCG TCCCCTGCGC ATCGTCGTTC CGTTCCCTGC TGGTGGCTCC
ACCGACATGG TCCCGCGCAA CATGCAGGAC GTGCTGCCCA AGCTGCTGGG CGGCCAGGCC
GTGGTGATCG AGAACAAGGC CGGCGCTGGC GGCTCCATCG GCATGGCCGA AGTGGCGCGT
GCCACCGACG GCGTGACCTT CGGCATCGCC ACGCTGTCCA CGCACGGCGT GAACCCCGCC
GTGTTCAAGA AGCTGCCCTA CGACGCCATC AACGATTTCG TCGGCGTGAC CGAGATCGTC
AAGGCGCCTG GCGTGATCGT GATCAACCCC AAGCTGGTGC CCGCCAACAA CTTCGCCGAG
TTCGTGAAGT ACCTGAAGGC CAACCCCGGC AAGGTCAGCT TCGCAACACC CGGCAACGGC
ACCATCGGCC ACATGTGGGG CGCCCAGTTC ATGAAGAGCA CGGGCACCGA GATGCAGCAC
ATTCCCTACC GCGGTGCAGG CCCGGCCATC AACGACGTGC TCGGCGGCCA GGTTCCCGTG
TACTTCGACC AGGTGGCTTC CTCGCTGCCC CACATCAAGG GCGGCAAGGT CAAGGCCCTG
GCCGTGTCCT GGCATGAGCG CCTGGACGTG CTGCCCGACG TGCAGACCTA CGCCGAAGCC
GGCCATGCCG ACCTGAACGA TCCCTCCTGG TTCGGCCTGG TGGCCCCCAA GAGCACGCCG
CCCGAGCAGA TCGCCCGCGT GCAAAAGGCC ATCGCGGCCG CGCTCAAGGA CCCGGCCGTG
CAAAAGCGCA TGGCGGCCCA GGGCCTGTAC ATCTCCGGCA CCAGCAGCGA CGCTTTCACC
AAGCAGATCG CCAGCGAAGT CGCCAAGATG AAGAAGATTG CCGCCACGGC CCAGATCCAG
CTGGATTAA
 
Protein sequence
MQRRHFLASI AASSVVPGMS FAQDTSRPLR IVVPFPAGGS TDMVPRNMQD VLPKLLGGQA 
VVIENKAGAG GSIGMAEVAR ATDGVTFGIA TLSTHGVNPA VFKKLPYDAI NDFVGVTEIV
KAPGVIVINP KLVPANNFAE FVKYLKANPG KVSFATPGNG TIGHMWGAQF MKSTGTEMQH
IPYRGAGPAI NDVLGGQVPV YFDQVASSLP HIKGGKVKAL AVSWHERLDV LPDVQTYAEA
GHADLNDPSW FGLVAPKSTP PEQIARVQKA IAAALKDPAV QKRMAAQGLY ISGTSSDAFT
KQIASEVAKM KKIAATAQIQ LD