Gene Daci_0859 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0859 
Symbol 
ID5746413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp965273 
End bp965620 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content63% 
IMG OID641295939 
Productmembrane protein of unknown function 
Protein accessionYP_001561890 
Protein GI160896308 
COG category[S] Function unknown 
COG ID[COG1950] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.195504 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCC TGATCAAATG GCTGCTCAGC GCCGGTGCCC TGCTGGTCGT GGCCTATCTC 
TATGGTGGCG TGCAGGTCAA CAGCTTCAGC TCGGCCATGA TCGCGGCGCT GGTCATCGGC
CTGCTCAATG CGGTGCTGCG CCCCATCCTC GTGGTGCTGA CGCTGCCCGT GACCATCGTG
ACGGTCGGGC TGTTTCTCTT CGTGGTCAAC GGACTGATGT TCTGGGCAGC CTCGGGCCTG
CTCAGCGGCT TTCACGTCGC GGGCTTCTGG GCGGCCATGC TGGGCGCGCT CATCTACTCG
CTGCTGGGCC TGGCCATCGA ATCACTTCTC GCGCGCCTGT TCCCTTAG
 
Protein sequence
MKILIKWLLS AGALLVVAYL YGGVQVNSFS SAMIAALVIG LLNAVLRPIL VVLTLPVTIV 
TVGLFLFVVN GLMFWAASGL LSGFHVAGFW AAMLGALIYS LLGLAIESLL ARLFP