Gene Daci_0796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0796 
Symbol 
ID5746350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp886464 
End bp887270 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content74% 
IMG OID641295876 
ProductIclR family transcriptional regulator 
Protein accessionYP_001561827 
Protein GI160896245 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTCGC GCAGCACCAA TCCAAACGTC CGGCCAGCGG ACATTCCAGT CTCCGCCGAC 
GATGCCGGCA GCCGCACGCT GCGCCGTGGC CTGCAGGTGC TGGACGCCGT GCTGGCCGCA
GGCCGCGAGG GCCTGCGCGT CGCTGACCTG TGCCGCGCCA CGGGGCTGGA GCGCGCCACG
GTGTACCGCC TGCTGTCCAC CCTGGTGGAC AGCGGCTATG TGGCGCACAG GGGGCGCTTC
GGCTATGCGG CCGGCCACCG GCTGGCGGCC ACGGCCGCCA GCGCGGGCCA GCCCAACATG
GCCGTGCGGC TGCAGCCCGT GCTGGAGCGC GTGAGCGCGG GCTGCGCGGA CGCGGCCTTC
GCCATCGTGC GCGAAGGCGC GGCATCGCAC TGCATCGCCC GCCATGTGGG CACGCATCCG
GTGCAGATCC TGGTGATCCA GGTGGGCACG CGCCAGCCGC TGGGCGTGGG AGCGGCGGGA
CTGGCCCTGC TGGCCGCCCT GCCCGATGCC GAGGTGCAGG CCGCGATGGT GGCCAACGCG
CCCGTGCTGG AGCAGTACGG CGGCATGACG CTCGAGCGCA TGGCCCTGCT GGTGAAGGCC
ACGCGCCAGC GCGGCTGGTC CGTCATCGGC AACCACGCCA CGCGCGGCGT GCTGGCCGTG
GGCATGGCGG TGCGCAATGC CGAAGGCGAG CCCGTGGCCG CCGTCAGCGT GGCCTCCACG
CTGGAGCGCA TGCCCGGCGA GCGCCAGAAG CTGATTGCGC GCTCGATAGG CGAGGCCCTG
GCGGCCCTGC TGCCGCGCGG CATCTGA
 
Protein sequence
MASRSTNPNV RPADIPVSAD DAGSRTLRRG LQVLDAVLAA GREGLRVADL CRATGLERAT 
VYRLLSTLVD SGYVAHRGRF GYAAGHRLAA TAASAGQPNM AVRLQPVLER VSAGCADAAF
AIVREGAASH CIARHVGTHP VQILVIQVGT RQPLGVGAAG LALLAALPDA EVQAAMVANA
PVLEQYGGMT LERMALLVKA TRQRGWSVIG NHATRGVLAV GMAVRNAEGE PVAAVSVAST
LERMPGERQK LIARSIGEAL AALLPRGI