| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0675 |
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| Symbol | |
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| ID | 5746228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 748198 |
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| End bp | 749805 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641295754 |
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| Product | regulator of RNA terminal phosphate cyclase |
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| Protein accession | YP_001561706 |
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| Protein GI | 160896124 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG4650] Sigma54-dependent transcription regulator containing an AAA-type ATPase domain and a DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAAGA AAAAGGTCGT CATCGGCTTT CTGGGTACGC AGCTGGACTC CGGCAGGGGC
GCGGGGCGCT GGGAAAAATG GCGGCCGACC CTCTCCCTCA TGCAGCATGA GGATCTGGTG
GTGGAGCGGC TGGAGCTGCT CTACACGCCG CCCCATCTGG CCCTGGCGCA GCTGCTGCAG
GGCGACATCG CCACGGCATC GCCCGAGACC CAGGTGAACC TCGTGCCCAT GGACATTGCC
GATCCCTGGG ATTTCGGCGA GGTCTATGCG CGGCTGTTCG ACTGGACGCA GGCCTACCGC
TTCGACCCCG AGCGCGAGGA GTACTGGACG CACATCACCA CGGGCACGCA CGTGGCACAG
ATCTGCCTGT TCCTGCTGGT GGAGTCGCGC CGCATTCCCG GCGTGCTGGC CCAGACGTCG
CCACCCCGGC GCCAGCGCAT GGGCGACCCT GGCAGCTATG CGCTGATCGA CCTGGACCTG
TCGCGCTACG ACGTGATCGC CCAGCGCTTC GGCGCCGAGC AGAGCGAGGC CGTGCAATTT
CTCAAGAGCG GCATCGCCAC GCGCAATGCC GGGTTCAATG CGCTGATCGA CGAGATCGAG
CGCGTGGCCG TGCGCTCGCG CGCGCCCATC CTGCTCACGG GTCCCACGGG TGCGGGCAAG
TCGCATCTGG CGCGGCGCAT GTACGAGTTG AAGAAGGCCA GGCACCAGGT TCAGGGCGAC
TTCGTGGAGG TCAATTGCGC CACGCTGCGC GGCGATGGTG CGGCCTCGGT GCTGTTCGGC
CACAAGAAGG GCGCGTTCAC GGGCGCTGCG GCCGACCGCG CCGGCCTGCT GCGCAGCGCG
CACCAGGGCG TGCTGTTCCT GGACGAAATC GGCGAGCTGG GCCTGGACGA ACAGGCCATG
CTGCTCAAGG CGGTGGAGGA AAGGCGCTTC TATCCCATGG GCAGCGACCG CGAGGTCAGC
AGCGACTTCC AGCTGGTCGC CGGCACGCAC CGCGACCTGC GCATCGACGT GGCGCAGGGG
CGCTTTCGCG AGGATCTGTT CGCGCGCATC AACCTGTGGT CCTACGCGCT GCCGGGCCTG
GCCGGGCGCC CCGAGGACAT AGAACCCAAC ATGGACCACC TGCTCGCGCG CTCGGCCGAC
GAGACCGGCC AGATGGTGCG CTTCAACGTG GAGGCCCGCG AGCGCTATCT GCGCTTTGCG
CGCTCGCCCG AGGCGCTGTG GAGCGGCAAC TTCCGCGACC TGTCGGCCAG CATGACGCGC
CTGGCCACGC TGGCCGACGG GGGGCGCATC TCCACGGCCC TGGTCGATGC CGAGATCCAG
CGCCTGAAGT GGCTGTGGCA AAGAGGCGAT GCCGTGCAAC CGGCCAGCGC CAGCCTGCAA
AGCCTGCTGT CTGCCGAAGT GCTGGAGCCG CTGGATCTGT TCGACCGCAT GCAGCTCGAA
GCGGTGCTGC GCGTGTGCCG AGAGTCGCCT TCGCTGTCCG ATGCGGGGCG CCGCCTGTTC
GACCAGTCAC GCACCCAGCG CAGCGTGGTC AACGATGCCG ACCGCCTGCG CAAGTACCTG
CTGAAATTCG GCTTGAAGTG GGATGCCGTG GCCGGCCGAA CGCCATAG
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| Protein sequence | MEKKKVVIGF LGTQLDSGRG AGRWEKWRPT LSLMQHEDLV VERLELLYTP PHLALAQLLQ
GDIATASPET QVNLVPMDIA DPWDFGEVYA RLFDWTQAYR FDPEREEYWT HITTGTHVAQ
ICLFLLVESR RIPGVLAQTS PPRRQRMGDP GSYALIDLDL SRYDVIAQRF GAEQSEAVQF
LKSGIATRNA GFNALIDEIE RVAVRSRAPI LLTGPTGAGK SHLARRMYEL KKARHQVQGD
FVEVNCATLR GDGAASVLFG HKKGAFTGAA ADRAGLLRSA HQGVLFLDEI GELGLDEQAM
LLKAVEERRF YPMGSDREVS SDFQLVAGTH RDLRIDVAQG RFREDLFARI NLWSYALPGL
AGRPEDIEPN MDHLLARSAD ETGQMVRFNV EARERYLRFA RSPEALWSGN FRDLSASMTR
LATLADGGRI STALVDAEIQ RLKWLWQRGD AVQPASASLQ SLLSAEVLEP LDLFDRMQLE
AVLRVCRESP SLSDAGRRLF DQSRTQRSVV NDADRLRKYL LKFGLKWDAV AGRTP
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