| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0672 |
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| Symbol | |
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| ID | 5746225 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 745017 |
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| End bp | 745703 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641295751 |
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| Product | lipopolysaccharide transport periplasmic protein LptA |
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| Protein accession | YP_001561703 |
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| Protein GI | 160896121 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1934] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03002] lipopolysaccharide transport periplasmic protein LptA |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.640265 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATGCAA GAAGCGTGCC CTCCATGAAA CAACGACTTT CCTCCCTCCT GCTCGCCGCC
GCCCTGGCGG CTTTCGCCGG TATGGCCCAG GCCGAAAAGG CCGACAGCAC CAAGCCCATG
AACATCGAGG CTGATGCGCT GCGCCATGAC GAACTCAAGC AGACCAGCGT CTTCACTGGC
AACGTGGTGA TGACCAAGGG CACCATCGTG CTGCGCGGCG CCCAGCTCGA TGTGCGGCAA
GACCCTGAAG GCTTTCAGTA CGGCGTGGTG ACGGCCGAGG CGGGCAAGCG TGCCTTCTTC
CGCCAAAAGC GCGATACCGT GCCGGGCCAA CCCGAGGAAT TCGTGGAAGG CGAGGGCGAG
GTCATCGAAT ACGACGGCAA GGCCGACCTC GTGAAGTTCA TCCGCCGCGG CGAACTGCGC
CGCTATCGCG GCGGCCAGCT CAGCGACGAA ATCACCGGCT CCATCATCGT CTACAACAAC
CTCACCGACG TGTTCACCGT TGACGGGCAA AAGACCAGCG GTGGCCAGCC CAGCTCCACG
GCCGGCCAGG GCGGTCGCGT GCGCGCCGTG CTGGCGCCCA AGGAAGGCAC GCCGGGCTCG
CAGCCGCGCG CCCCCGCAGC GGGCACGCCG GGCACGTCCC TGCAGCCCAG CAACAGCCTG
GACAGCCTCG GCGGTACCAA GCGATGA
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| Protein sequence | MDARSVPSMK QRLSSLLLAA ALAAFAGMAQ AEKADSTKPM NIEADALRHD ELKQTSVFTG
NVVMTKGTIV LRGAQLDVRQ DPEGFQYGVV TAEAGKRAFF RQKRDTVPGQ PEEFVEGEGE
VIEYDGKADL VKFIRRGELR RYRGGQLSDE ITGSIIVYNN LTDVFTVDGQ KTSGGQPSST
AGQGGRVRAV LAPKEGTPGS QPRAPAAGTP GTSLQPSNSL DSLGGTKR
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