Gene Daci_0657 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0657 
Symbol 
ID5746200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp718462 
End bp719352 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content65% 
IMG OID641295726 
ProductMCP methyltransferase, CheR-type 
Protein accessionYP_001561688 
Protein GI160896106 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG1352] Methylase of chemotaxis methyl-accepting proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.120935 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGATCCG GCTCATCCAA TGCGGCACTG GCCGCACGTC CCGTCGCCGA CGACGGGGAT 
GCCAACGGGC CCCTGGCCCA GGGGCGCGAA TTCGAATGGT CGTCGCGGGA CTTTGCCCGC
GTACAGGCGC TGATCTACCA GCGGGCCGGC ATCAGCTTGC ACGATGGCAA GCACGCCATG
GTCTACAGCC GCCTGTCGCG GCGCCTGCGC GAGACGGGCT ACGACAGCTT CTCCACCTAC
CTGGACTGGC TGGAGTCGCA GTCCGACGGC GTGGAGTGGC AGGAGTTCGT GAACGCGCTG
ACCACCAATC TCACGGCGTT CTTTCGCGAG CAGCACCATT TCGAGATCTT TGCCCAGCAT
CTGCGCAGCA AGCCGGCCGG CACGGCCTGG AAGGTCTGGT GCAATGCGGC CTCGACCGGG
GAAGAGCCTT ACTCCATCGT CATGACGGCG CTGGAAGCGC TGGGTGCCAC GCCCAGCTTT
CAGCTGCAGG CCAGCGACAT CGACTCGCGC GTGCTGGACA CGGCATCGGC CGGCGTCTAC
CGCGCCGAAA GCATCAAGGG CATGAGCGCC GAGCGCCTGC ACCGCTTTTT CCTGCGGGGA
AAGGCCGGCA ATGCAGGCCT GGTGCCCGTC AAGCCCGAAC TGCGCCGCCT GGTGGAGTTT
CTCAACGTCA ACCTGATCCG TGACGACTGG CCGTTCCGAG ACCCCTTCGA CGTGGTCTTC
TGCCGCAACG TGATGATCTA CTTCGACGCG GCCACGCAGC GCCGCGTGCT GGAGCGCATC
CACCGCGTGA TGAAGCCCGG TGGCCTGTTG TTCGTCGGGC ATGCCGAGAA CTTCAGTGAA
TCGCGCGATC TGTTCACGCT CAAGGGGAAG ACCGTCTATG AGCGCCGCTG A
 
Protein sequence
MRSGSSNAAL AARPVADDGD ANGPLAQGRE FEWSSRDFAR VQALIYQRAG ISLHDGKHAM 
VYSRLSRRLR ETGYDSFSTY LDWLESQSDG VEWQEFVNAL TTNLTAFFRE QHHFEIFAQH
LRSKPAGTAW KVWCNAASTG EEPYSIVMTA LEALGATPSF QLQASDIDSR VLDTASAGVY
RAESIKGMSA ERLHRFFLRG KAGNAGLVPV KPELRRLVEF LNVNLIRDDW PFRDPFDVVF
CRNVMIYFDA ATQRRVLERI HRVMKPGGLL FVGHAENFSE SRDLFTLKGK TVYERR