Gene Daci_0575 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0575 
Symbol 
ID5746118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp631690 
End bp632436 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content71% 
IMG OID641295644 
ProductABC transporter related 
Protein accessionYP_001561606 
Protein GI160896024 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACA CCCTTTTGCA GCTCAGGGGC CTGAGCGTGT CCTACGGTCC CGTGGAGGCC 
GTGCACCAGG TGGATCTGGA TGTGCGCAGC GGCGAGATCG TCACCGTCAT CGGCCCCAAC
GGCGCGGGCA AGACCACGCT GCTGTCGGCC GCCATGGGCC TGCTGCCCTC GCGCGGCGAG
ATCCATCTGG ACGGCAAGCG CATCGCACGC CCCGGCGTCG AGGTCATGGT GGCCAACGGC
GTGGCCCTGG TGCCCGAAAA GCGCGAGCTG TTCGGCGAGA TGTCGGTGGA AGACAACCTG
CTGCTGGGCG GCTTCTCGCG CTGGCGCCGG GGCCTGCGCG ACCAGGCGCA GCGCATGGAC
GAGGTCTTTG CCATCTTCCC GCGCCTGAGG GAGCGGCGCC CGCAGATGGC CTCCACCCTG
TCGGGCGGCG AGCGCCAGAT GCTGGCCATC GGCCGCGCGC TGATGGCACG CCCGCGCCTG
CTGCTGCTGG ACGAGCCCTC GCTGGGCCTG GCGCCGCTGA TCGTGCGCGA GGTGCTGCAG
GTCGTGGCCG GCCTGCGCGA CCACGGCGTC TCGGTGCTGC TGGTAGAGCA GAACGCGCGC
GCCGCCCTCA AGGTGGCCGA CCGTGCCTAC GTGCTGGAGA TGGGCGCCGT GGCCCTCAGC
GGCGCGGCCA GGGATCTGCT GCACGACCGG CGCATCATCG ATACCTATCT GGGGATGGGG
CGCAGTGCGG AGGCGGTGGC CGCATAA
 
Protein sequence
MSDTLLQLRG LSVSYGPVEA VHQVDLDVRS GEIVTVIGPN GAGKTTLLSA AMGLLPSRGE 
IHLDGKRIAR PGVEVMVANG VALVPEKREL FGEMSVEDNL LLGGFSRWRR GLRDQAQRMD
EVFAIFPRLR ERRPQMASTL SGGERQMLAI GRALMARPRL LLLDEPSLGL APLIVREVLQ
VVAGLRDHGV SVLLVEQNAR AALKVADRAY VLEMGAVALS GAARDLLHDR RIIDTYLGMG
RSAEAVAA