Gene Daci_0459 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0459 
Symbol 
ID5745996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp490250 
End bp491023 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content69% 
IMG OID641295522 
Producthypothetical protein 
Protein accessionYP_001561490 
Protein GI160895908 
COG category[S] Function unknown 
COG ID[COG5419] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.445694 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCAGCC CTCACCATTT CCCGCACTGG TATCCCACCG CCGCCTACCT CTACGTTCTG 
CGGCTCGATG CACTCGCACT GGCCTGTGAG TACCTGCGGC GCCATCCCGA CTACCGGCTC
GACTGGCTGC ACCGTCATCG CCGGCCGCAG GCGGCACAGC ACGCGGCGCA TCGCTGGGGC
TTACGCCTGC TGGAAGACCC AGCCTTGGAT GCGCGCGACG CGCATCCGGC CTGGCTCCCC
GGCCATGCCG GCGTGGTGCA GCTCTACCCC GATGCCGACC CACCGCAGAA TGCCACCGCC
TTCGCGTTCT GGCGCATCCC TGGTCACAAG CAATTGATCC ACGATGGCAA GCGGCTGGTG
CTGATCGCGC GCAGCCCTGG CCATTGCCTG CGCTTCGCGC TGGCACCCGG CCTGGAGGAC
GGCATGGCTG TCGCCTATGC CCATCACGGC GGTGCTGCCG CACCTGCACG CGGCCATGCG
CCCGGTGCGG CGCTGGCCAA TGCTCGGCCC CGGCCATCGC ATTCGGCCTT GCTGGAACTG
CACACCTTGC AGGCGCTCGA CGCAACCCTG GCGGGTGCGT CCTTGCGCGA TGTGGCCGAA
GGCTTGTTCG GCGTGGATGC CGCAGCCGGT TGGTACAGCG ACGGCGGCCT GCGCTCCAAG
GTGCGCCGCC TGACGCGGCG CGGCGATGCG CTGATGCGCG GCGGCTATCG CCGCCTAGCA
CAGCTTGCGC CGCTTGAGAA GGGTCGTTTT GAAGGCCACG CAAAACGACC CTGA
 
Protein sequence
MVSPHHFPHW YPTAAYLYVL RLDALALACE YLRRHPDYRL DWLHRHRRPQ AAQHAAHRWG 
LRLLEDPALD ARDAHPAWLP GHAGVVQLYP DADPPQNATA FAFWRIPGHK QLIHDGKRLV
LIARSPGHCL RFALAPGLED GMAVAYAHHG GAAAPARGHA PGAALANARP RPSHSALLEL
HTLQALDATL AGASLRDVAE GLFGVDAAAG WYSDGGLRSK VRRLTRRGDA LMRGGYRRLA
QLAPLEKGRF EGHAKRP