| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0434 |
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| Symbol | |
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| ID | 5745971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 464715 |
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| End bp | 465440 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641295497 |
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| Product | conjugal transfer protein TrbJ |
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| Protein accession | YP_001561465 |
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| Protein GI | 160895883 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5314] Conjugal transfer/entry exclusion protein |
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| TIGRFAM ID | [TIGR02780] P-type conjugative transfer protein TrbJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.856539 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGC GTCTTGTCGC CGCCGCAATC GCGGCCATGC TTTGCACCGC CACCGCCCAT
GCGCAATGGG TCGTGGTCGA TCCCACCAAC CTCGTGCAGA ACACGCTGAC CGCGATCCGC
ACGCTGGAGC AGATCAACAA CCAGATCCAG CAGCTTCAGA ACGAAGCGCA GATGCTGATG
AACCAGGCGC GCAATCTCGC CAGCCTGCCA TCCAGCGTGG TCGGCCAGTT GCGCGCCAAT
CTGGCGACCA CGCAGCGGCT GATCGACCAG GCGCGCGGCC TGGCCTACGA CGTGACGAAT
CTGGATCGGG AGTTTCAGCG CCTGTATCCC GAGCAGTACG CCGCCACGGT GAGCGGCGAC
CAGATGTACC GCGACACGCA GGAGCGATGG AAGAACACGC TCAACGGCTT GCAGACCACG
ATGCGGATGC AGGCCCAGGT TTCGCAGAAC CTGGGCGAAG ACGAAAGCGT GCTCGCCGAC
CTCGTGGGCA AGAGCCAGTC AGCCGAAGGT GCGTTGCAGG CGATGCAGGC CATGAACCAG
TTGCTGGCCT TGCAGGCCAA GCAGTCGATC CAGTCGCAGC GGCTCCAGAT CACGCAGGAT
CGCGCTGCCG CGCTGGAACT GGCGCGGCAG GCGGCGGCCA CGGAGCGCGG ACGTGAGATG
ACGCGCCGCT TCCTGGGCAG TGGCACGCCG TACACGCCGC AAGCCGTCGA TTTCTACAAC
CACTGA
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| Protein sequence | MKKRLVAAAI AAMLCTATAH AQWVVVDPTN LVQNTLTAIR TLEQINNQIQ QLQNEAQMLM
NQARNLASLP SSVVGQLRAN LATTQRLIDQ ARGLAYDVTN LDREFQRLYP EQYAATVSGD
QMYRDTQERW KNTLNGLQTT MRMQAQVSQN LGEDESVLAD LVGKSQSAEG ALQAMQAMNQ
LLALQAKQSI QSQRLQITQD RAAALELARQ AAATERGREM TRRFLGSGTP YTPQAVDFYN
H
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