Gene Daci_0330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0330 
Symbol 
ID5745867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp370198 
End bp370926 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content76% 
IMG OID641295393 
ProductAraC family transcriptional regulator 
Protein accessionYP_001561361 
Protein GI160895779 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTACA CCCTCTCTTC CCTCCACAGC GATGCCGCCG CGCAAGACGG CGCGGCCGAT 
GCCACCGATA CCGCCTTCGC GCCGCACAGC TCGGTGCGCA GCTACAGCGG CGAGCACCAG
GCCCACGCCC ACGGCCATGC GCAGATCCTC TATGCCCTGC AGGGCCGCAT GGAGCTGGAG
GTGGGCGGGC GCAGCGCCTT TGTGGACGCC GTCAGCGGCA TGCTCATCCC CGCCGGCGTG
GACCACGGCT ACCTGGCGGC GCCGCGCTCG CGCGTGTTCG TCATCGATGC GCCCAGCGGC
CCGGGGCTGG ACCGGATGCG GCGCTTTTCC GTGCCACCGG CCCTGCGCGG CCGGGAGTCG
GAAGGCCCGG CCACAGAGCA ACTGGCCCAG GTGCTGCAGG CGCCCGGCCT GCTGGCGCGC
CGGGGGCTGG ACCTGCAAGG GCTGGCCGCG CAGGTGCAGG CCGCGCTGCA CGAGGACTGG
CCCACGGCCC GGCTGGCCGC CCTGTGCCAC ATGAGCGCCC AGCGCTTTCA CGCGCGCTTC
GTGGAGCTGG CGGGCCAGCC GCCCCAGGCC TGGCTGCGCG GCCTGCGCCT GGATGCGGCC
GAGCGCGGGC TGGCGCGGGG CCTGCCTCTG GAGGCCACGG CGCTGCGCTG CGGCTATGCC
TCGGCCAGTG CGCTGGCCTA TGCGCTGCGG CGCGACCGGG GCGTGACGGC GCGGCAGCTG
CGCGGCTAG
 
Protein sequence
MAYTLSSLHS DAAAQDGAAD ATDTAFAPHS SVRSYSGEHQ AHAHGHAQIL YALQGRMELE 
VGGRSAFVDA VSGMLIPAGV DHGYLAAPRS RVFVIDAPSG PGLDRMRRFS VPPALRGRES
EGPATEQLAQ VLQAPGLLAR RGLDLQGLAA QVQAALHEDW PTARLAALCH MSAQRFHARF
VELAGQPPQA WLRGLRLDAA ERGLARGLPL EATALRCGYA SASALAYALR RDRGVTARQL
RG