Gene Daci_0310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0310 
Symbol 
ID5745846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp350314 
End bp351615 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content66% 
IMG OID641295372 
Productlysophospholipid transporter LplT 
Protein accessionYP_001561341 
Protein GI160895759 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.571757 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGCG GTTTCTACAC CATCATGTCA GCGCAGTTCT TCAGCTCGCT GGCAGACAAC 
GCCCTGTTCG TGACCGCCGT GGAACTGCTG CGCACCAATG GCGCCCCCGA GTGGCAGCGC
GCCGCCCTGG TGCCCATGTT CGCGCTGTTC TACGTGATCC TGGCCCCCTT CGTCGGCGCC
TTTGCCGACG CCCTGCCCAA GGGGCGGGTG ATGTTCATCA GCAATGCGAT CAAGATCGTG
GGCTGCCTGA TGATGCTGTT CGGCAACCAC CCGCTGATCG CCTACGCCGT GGTGGGCCTG
GGCGCAGCGG CCTACTCGCC GGCCAAGTAC GGCATCCTCA CCGAATTGCT GCCCGCCTCC
CAGCTGGTCA AGGCCAATGG CTGGATCGAG GGGCTGACCA TCACCTCCAT CATCCTGGGC
GTGCTCGTGG GCGGGCAGTT GCTGAGCCCG GGCATCTCGG CACATCTGCT GGACTTTGAC
CTGCCGCTGC TGGACACGGG CGTGGACACG GCCGCCGAAG CGGCGATTGC CGTGCTGGTC
GGCGTCTATG CGCTGGCCGC CTGGTTCAAC CTGCGCATTC CGCTGACCGA CACCATCCTG
CGCCCGCTGC GCCAGGACCC CAGCAAGAGC CTGCTGGCCA ACACCCTGGC CCTGCTGCCC
GACTTCTGGA CCTGCAGCCA GCGGCTGTGG GGGGACAAGC TGGGCCAGAT CTCGCTGTCC
ACGACCACGC TGTTCTGGGG CGTGTCGGGC AACCTGCGCT ACATCGTGCT GGCCTGGGGC
GCGGCGGCCC TGGGCTACGG CACCTCCCAG GCATCGGCCC TGGTGGGCGT GGTGGCCATC
GGCACGGCCG CAGGCGCCAT CCTCGCGTCC ATGCGCATGC GGCTGGACAA CGCCACGCGC
GTGATTCCGC TGGGCATCAC CATGGGCCTG CTGGTGATCG CCATGATCTT CATCAAGAGC
GTGTGGGTGG CCATTCCCTT CCTGATCCTG CTGGGCGGCC TGGGCGGCTT CCTGGTCGTG
CCCATGAATG CGCTGCTGCA GCACCGCGGC CACAACCTCA TGGGCGCGGG CCGCTCGATT
GCCGTGCAGA ACTTCAACGA GCAGGCCTGC ATCCTGGCGC TGGGCGCCTT CTATGCGCTG
TCCACCAAGT TCGGACTGTC GGCTTTCGGC GCCATCACGG TGTTCGGCCT GGTGGTGGCC
GGCATCATGT GGCTGATCGG CCGCTGGCAC GTCAGCAACG TGCGCAACTA TCCCGAGGAA
GTCGAGCGCC TGCTGGTGAT TGCCCGCAAG GATTGTCATT GA
 
Protein sequence
MKRGFYTIMS AQFFSSLADN ALFVTAVELL RTNGAPEWQR AALVPMFALF YVILAPFVGA 
FADALPKGRV MFISNAIKIV GCLMMLFGNH PLIAYAVVGL GAAAYSPAKY GILTELLPAS
QLVKANGWIE GLTITSIILG VLVGGQLLSP GISAHLLDFD LPLLDTGVDT AAEAAIAVLV
GVYALAAWFN LRIPLTDTIL RPLRQDPSKS LLANTLALLP DFWTCSQRLW GDKLGQISLS
TTTLFWGVSG NLRYIVLAWG AAALGYGTSQ ASALVGVVAI GTAAGAILAS MRMRLDNATR
VIPLGITMGL LVIAMIFIKS VWVAIPFLIL LGGLGGFLVV PMNALLQHRG HNLMGAGRSI
AVQNFNEQAC ILALGAFYAL STKFGLSAFG AITVFGLVVA GIMWLIGRWH VSNVRNYPEE
VERLLVIARK DCH