| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0309 |
|---|
| Symbol | |
|---|
| ID | 5745845 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 349216 |
|---|
| End bp | 350115 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641295371 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001561340 |
|---|
| Protein GI | 160895758 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2962] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.136824 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACAGCC CCCTGCCCGT TCTCGCCCTG CTGTTCAACA CCCTGGTCTG GGGTCTGGCC
TGGTGGCCGT TTCGCGCCAT GCACGAGGCC GGCCTGCATC CGCTGTGGGC CACGGCGCTG
ATGTATGCCC TGGTGCTGGC GGGGCTGGTG GCGCTGCGCC CGGCCAGCCT GCGCCAGGCG
CTGCAGTACC CGGTGCTGAT CCTGCTGGGT GCCTGCGCGG GCAGCAACAA CATCGCCTTC
AACTGGGCCG TGACCATTGG CGATGTGGTG CGCGTGGTGC TGCTGTTCTA TCTGATGCCG
GCGTGGTCCG TGCTGCTGGC CTGGAAGATC CTGGGCGAGC GGCCCACGCC GGCCGCGCTG
ACACGGCTGC TGCTGGCCTT TGGCGGGGTG GCGCTGGTGC TGGTGCCCGA GGGCACATTC
AGCGGCGGCT CGCCCGGGCT GCTGCGCGGT CTGTCGCTGG CCGACGGCCT GGCACTGTTT
GGCGGCTTCA CCTTTGCGCT GACCAATGTG CTGCTGCGCC GCCTGCAGGC CGTGCCGGCG
CAGGCGCGCA TGCTGGCCAT GTTCAGCGGC TGCATGGCCA TGGGACTGGC CAGCGCCTTC
GCGGGCAGCA GCGTGGGGCT GGTGCCGCCC ATGCCTGCGC CGCAGGCCGG CTGGATGCTG
ATTGCCGCCG GCTTGGCCGT GCTGCTGATG CTGGGCAACT GGGCGCTGCA GTTCGGCGCC
GCGCGCCTGC CGGCCGGCGT GACCGCCGTG GTCATGCTGG CCGAGGTGGT GTTTGCCAGC
GCCTCCTCGG TGTTGATTGC AGGCGAGGTG CTGACGCCGC GCACGCTGCT GGGCGGCGCC
TGCATCATCG CGGCCGCGCT GCTGTCTGCA CTGGCGCATG CACGGCGGCG TGGGGCTTGA
|
|---|
| Protein sequence | MHSPLPVLAL LFNTLVWGLA WWPFRAMHEA GLHPLWATAL MYALVLAGLV ALRPASLRQA
LQYPVLILLG ACAGSNNIAF NWAVTIGDVV RVVLLFYLMP AWSVLLAWKI LGERPTPAAL
TRLLLAFGGV ALVLVPEGTF SGGSPGLLRG LSLADGLALF GGFTFALTNV LLRRLQAVPA
QARMLAMFSG CMAMGLASAF AGSSVGLVPP MPAPQAGWML IAAGLAVLLM LGNWALQFGA
ARLPAGVTAV VMLAEVVFAS ASSVLIAGEV LTPRTLLGGA CIIAAALLSA LAHARRRGA
|
|---|
| |