Gene Daci_0253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0253 
Symbol 
ID5745789 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp284785 
End bp285573 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content69% 
IMG OID641295315 
ProductGntR domain-containing protein 
Protein accessionYP_001561284 
Protein GI160895702 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.6565 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAGCA CCATGGAAAG TTCGGCAAAG GGATTTCCCG CATCACCCCC AACGATCGAG 
CTTCCCCTGC GAGGAAAGTC CGGTCGCAGC GGCCGCAATC TGGCCGCCCT GCTGTTCGAC
GAGTTCGCGA GCAAGATCCG CAACGGCCTG CTGGCCGAAG GCGAGAAGCT GCCCACGGAG
TCGTCGCTGG TGCAGACCTA CGAAGTCAGC CGCACCGTGG TGCGCGAGGC GCTGTCGCGC
CTGCAGGCCT CGGGCCTGGT GGAGACGCGC CACGGCATAG GCACCTTCGT GCGCGCCGCC
CAGCCCGCAT CCACGCTGAT GCTCAATGCC GACGAGCTGA CGGCCGCCGT GGACGTGATG
GCCGTGCTGG AGCTGCGCAT CAGCCTGGAG ACCGAAAGCG CCGGCCTGGC CGCGCTGCGC
CGCAGCCCCG AGCAGCTGCA GGGCATACGC ATGGCGCTGC AGGCCTTCGA AATCGCCTTT
GCGCGCGGCG AGGACACGGT GGCCCATGAC CTGGCCTTCC ACACCCAGAT CGCCGAGGCC
ACGGGCAACC GCTACTTCGG CGACATCCTG CGGCACTTCG GCGCCCAGCT GATTCCGCGC
ACGCGCATCG CCTCCATCCA CCAGCCCCAG CGCGACCCCG ATTACCTGCG CCGCGTCAAC
CGCGAGCATG AGGAAATCCT CGCCGCCATC GAGCGCCAGG ATGCCGACTC GGCCCGCGCG
GCCATGCGCA TCCACCTGAC CAACAGCCGC GAACGCCTGC GCCTGGCGCA AAAGACCAGC
GCCGCCTGA
 
Protein sequence
MISTMESSAK GFPASPPTIE LPLRGKSGRS GRNLAALLFD EFASKIRNGL LAEGEKLPTE 
SSLVQTYEVS RTVVREALSR LQASGLVETR HGIGTFVRAA QPASTLMLNA DELTAAVDVM
AVLELRISLE TESAGLAALR RSPEQLQGIR MALQAFEIAF ARGEDTVAHD LAFHTQIAEA
TGNRYFGDIL RHFGAQLIPR TRIASIHQPQ RDPDYLRRVN REHEEILAAI ERQDADSARA
AMRIHLTNSR ERLRLAQKTS AA