Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_0253 |
Symbol | |
ID | 5745789 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 284785 |
End bp | 285573 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641295315 |
Product | GntR domain-containing protein |
Protein accession | YP_001561284 |
Protein GI | 160895702 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.6565 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAGCA CCATGGAAAG TTCGGCAAAG GGATTTCCCG CATCACCCCC AACGATCGAG CTTCCCCTGC GAGGAAAGTC CGGTCGCAGC GGCCGCAATC TGGCCGCCCT GCTGTTCGAC GAGTTCGCGA GCAAGATCCG CAACGGCCTG CTGGCCGAAG GCGAGAAGCT GCCCACGGAG TCGTCGCTGG TGCAGACCTA CGAAGTCAGC CGCACCGTGG TGCGCGAGGC GCTGTCGCGC CTGCAGGCCT CGGGCCTGGT GGAGACGCGC CACGGCATAG GCACCTTCGT GCGCGCCGCC CAGCCCGCAT CCACGCTGAT GCTCAATGCC GACGAGCTGA CGGCCGCCGT GGACGTGATG GCCGTGCTGG AGCTGCGCAT CAGCCTGGAG ACCGAAAGCG CCGGCCTGGC CGCGCTGCGC CGCAGCCCCG AGCAGCTGCA GGGCATACGC ATGGCGCTGC AGGCCTTCGA AATCGCCTTT GCGCGCGGCG AGGACACGGT GGCCCATGAC CTGGCCTTCC ACACCCAGAT CGCCGAGGCC ACGGGCAACC GCTACTTCGG CGACATCCTG CGGCACTTCG GCGCCCAGCT GATTCCGCGC ACGCGCATCG CCTCCATCCA CCAGCCCCAG CGCGACCCCG ATTACCTGCG CCGCGTCAAC CGCGAGCATG AGGAAATCCT CGCCGCCATC GAGCGCCAGG ATGCCGACTC GGCCCGCGCG GCCATGCGCA TCCACCTGAC CAACAGCCGC GAACGCCTGC GCCTGGCGCA AAAGACCAGC GCCGCCTGA
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Protein sequence | MISTMESSAK GFPASPPTIE LPLRGKSGRS GRNLAALLFD EFASKIRNGL LAEGEKLPTE SSLVQTYEVS RTVVREALSR LQASGLVETR HGIGTFVRAA QPASTLMLNA DELTAAVDVM AVLELRISLE TESAGLAALR RSPEQLQGIR MALQAFEIAF ARGEDTVAHD LAFHTQIAEA TGNRYFGDIL RHFGAQLIPR TRIASIHQPQ RDPDYLRRVN REHEEILAAI ERQDADSARA AMRIHLTNSR ERLRLAQKTS AA
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