Gene Daci_0237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0237 
Symbol 
ID5745773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp267790 
End bp269133 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content66% 
IMG OID641295299 
ProductC4-dicarboxylate transporter DctA 
Protein accessionYP_001561268 
Protein GI160895686 
COG category[C] Energy production and conversion 
COG ID[COG1301] Na+/H+-dicarboxylate symporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCGCT TTGCCAGATC ACTGTTCGGA CAGGTGGTGA TCGCACTCAT CCTGGGTGTG 
CTCGCCGGAA TATTGGCCCC TGAATGGGCC GTGAAGCTCA AGCCCCTGGG CGATGGCTTC
ATCAAGCTCA TCAAGATGAT CATTCCCGTG CTGGTGTTCT GCGTGGTGGT GCACGGCATC
GCGGGCGCAG GCGACCTCAA GCGCGTGGGC CGGGTCGGCG TCAAGTCGCT GATCTACTTC
GAGGTGCTGA CCACCATCGC CCTGGTGCTG GGCCTGGTGC TGGCCTTCGT GTTCCAGCCC
GGCGCGGGCA TGAACGTGGA CCCGAGCAAG CTCGACGCCT CGGCCATGAG CGCCTACGCC
AGCAACGCCG ACAAGCTGAC CAGTGGCGGC ACGGTGGACT TCCTGATGAA GCTCATCCCC
ACCACCGTGG TGCAGGCCTT TGCCACGGGC GACGTGCTGC AGGTGCTGCT GTTCGCCGTG
CTGTTCGGCT GCGCGCTGAC CATGCTGGGC GAGCGCGGCG CGCCCGTGCA TGCGCTGATC
GACACGCTGT CGAACGTGCT GTTCAAGATC ATGGGCATCC TCATCAAGCT GGCGCCGCTG
GGCGTGCTGG GTGCGATCTC GTTCACCGTG GGCCAGTACG GCATAGGCTC GCTCAAGCAG
CTGGGCATGC TGGTGCTGCT GTTCTACGTG GCGGTGATCT TCTTCGTCTT CGTGGTGCTG
GGGCTGGTGA TGCGCTTTTC GGGCTTCAGC CTGATCAAGC TGCTGCGCTA CCTGCGCGAG
GAGCTGATGG TGGTCTTCGC CACCACCTCC TCGGACAGCG TGCTGCCCCA GATCATGGCC
AAGCTGCGCA ACATGGGCGT GCGCGACTCC ACCGTGGGCC TGGTGATTCC CACGGGCTAC
TCGTTCAACC TGGACGCCTT TTCCATCTAC ATCACGCTGG CGGCCGTGTT CATCGCCCAG
GCCACGAACA CGCCCATCGG CATGGCCGAC CTGCTGACCA TCCTGGCGAT TGCGCTGGTG
ACCTCCAAGG GCGCCCACGG CGTGCCGGGC TCGGCCATCG TGGTGCTGGC GGCCACGCTG
CATGCGATTC CGGCCATCCC CGCCATCGGC CTGGTGCTGG TGCTGTCGGT GGACTGGTTC
ATGGGCATTG CCCGCGCGCT GGGCAACCTG ATCGGCAACT GCGTGGCCAC CGTGGCCATC
GCCGCCTGGG AAGGTGACAT CGACCGCGAG CGCGCCCATG CCGTGCTCAA CGGCCTGGCC
GACAATCAGG GGCCCGACGC CGAGCCCTCC GGCGCCGCCG CCGTCCCCGC AACCGTGACT
TCTGCCCACC CTGCAACGCA ATGA
 
Protein sequence
MRRFARSLFG QVVIALILGV LAGILAPEWA VKLKPLGDGF IKLIKMIIPV LVFCVVVHGI 
AGAGDLKRVG RVGVKSLIYF EVLTTIALVL GLVLAFVFQP GAGMNVDPSK LDASAMSAYA
SNADKLTSGG TVDFLMKLIP TTVVQAFATG DVLQVLLFAV LFGCALTMLG ERGAPVHALI
DTLSNVLFKI MGILIKLAPL GVLGAISFTV GQYGIGSLKQ LGMLVLLFYV AVIFFVFVVL
GLVMRFSGFS LIKLLRYLRE ELMVVFATTS SDSVLPQIMA KLRNMGVRDS TVGLVIPTGY
SFNLDAFSIY ITLAAVFIAQ ATNTPIGMAD LLTILAIALV TSKGAHGVPG SAIVVLAATL
HAIPAIPAIG LVLVLSVDWF MGIARALGNL IGNCVATVAI AAWEGDIDRE RAHAVLNGLA
DNQGPDAEPS GAAAVPATVT SAHPATQ