Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_0227 |
Symbol | |
ID | 5745763 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 257266 |
End bp | 258012 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641295289 |
Product | ABC transporter related |
Protein accession | YP_001561258 |
Protein GI | 160895676 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGCTCG TTGATGTGCG CGCCGTTCAC AAGCATTACG GCAACAACCA TGTGCTCAAG GGCGTGGACC TGAGCGTGGA CAGCGGCCAG GTGGTCGCCA TCATCGGCCG CAGCGGCTCG GGCAAGAGCA CGCTGCTGCG CTCCATCAAC GGGCTGGAGG CCATCCAGTC CGGCCAGATC GTGGTGGACG ACGCCGTGCT CAAGGGCTCG GAGGGCAGCG CGCCCTCGCC CGCCCAGCTG CGCGCGCTGC GCCTGAACGT GGGCATGGTG TTCCAGCAGT TCAACCTGTT CCCCCACCTG ACGGCGGGCG AGAACGTGGC CCTGTCGCCC ACCGTGGTCA AGGGCGTGAA AAAACCCGAG GCGGCGGCGC TGGCGCGCCA GATGCTGGCC AAGGTCGGCC TGGGCGACAA GTACGACAGC TACCCCGACC AGCTCAGCGG CGGCCAGCAG CAGCGCGTGG CGATTGCTCG CGCGCTGGCC ATGCAGCCCA AGGTGCTGCT GTGCGACGAG ATCACCTCGG CCCTGGACCC GGAGCTGGTC AACGAGGTGC TGGCCGTGGT CAAGCAGCTC GCCGCCGAGG GCATGACGCT GATCATGGTC ACGCACGAGA TGCGCTTTGC CCGCGACGTG GGCGACCAGC TGGTGTTCAT GCACCAGGGC CTGATCCACG AAAGCGGCCC GGCCAAGCAG CTGTTCGCCA ACCCGCAGAC GCCGGAGCTG GCCGGCTTCA TCGGCGCCGT GCACTGA
|
Protein sequence | MPLVDVRAVH KHYGNNHVLK GVDLSVDSGQ VVAIIGRSGS GKSTLLRSIN GLEAIQSGQI VVDDAVLKGS EGSAPSPAQL RALRLNVGMV FQQFNLFPHL TAGENVALSP TVVKGVKKPE AAALARQMLA KVGLGDKYDS YPDQLSGGQQ QRVAIARALA MQPKVLLCDE ITSALDPELV NEVLAVVKQL AAEGMTLIMV THEMRFARDV GDQLVFMHQG LIHESGPAKQ LFANPQTPEL AGFIGAVH
|
| |