Gene Daci_0227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0227 
Symbol 
ID5745763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp257266 
End bp258012 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content68% 
IMG OID641295289 
ProductABC transporter related 
Protein accessionYP_001561258 
Protein GI160895676 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCTCG TTGATGTGCG CGCCGTTCAC AAGCATTACG GCAACAACCA TGTGCTCAAG 
GGCGTGGACC TGAGCGTGGA CAGCGGCCAG GTGGTCGCCA TCATCGGCCG CAGCGGCTCG
GGCAAGAGCA CGCTGCTGCG CTCCATCAAC GGGCTGGAGG CCATCCAGTC CGGCCAGATC
GTGGTGGACG ACGCCGTGCT CAAGGGCTCG GAGGGCAGCG CGCCCTCGCC CGCCCAGCTG
CGCGCGCTGC GCCTGAACGT GGGCATGGTG TTCCAGCAGT TCAACCTGTT CCCCCACCTG
ACGGCGGGCG AGAACGTGGC CCTGTCGCCC ACCGTGGTCA AGGGCGTGAA AAAACCCGAG
GCGGCGGCGC TGGCGCGCCA GATGCTGGCC AAGGTCGGCC TGGGCGACAA GTACGACAGC
TACCCCGACC AGCTCAGCGG CGGCCAGCAG CAGCGCGTGG CGATTGCTCG CGCGCTGGCC
ATGCAGCCCA AGGTGCTGCT GTGCGACGAG ATCACCTCGG CCCTGGACCC GGAGCTGGTC
AACGAGGTGC TGGCCGTGGT CAAGCAGCTC GCCGCCGAGG GCATGACGCT GATCATGGTC
ACGCACGAGA TGCGCTTTGC CCGCGACGTG GGCGACCAGC TGGTGTTCAT GCACCAGGGC
CTGATCCACG AAAGCGGCCC GGCCAAGCAG CTGTTCGCCA ACCCGCAGAC GCCGGAGCTG
GCCGGCTTCA TCGGCGCCGT GCACTGA
 
Protein sequence
MPLVDVRAVH KHYGNNHVLK GVDLSVDSGQ VVAIIGRSGS GKSTLLRSIN GLEAIQSGQI 
VVDDAVLKGS EGSAPSPAQL RALRLNVGMV FQQFNLFPHL TAGENVALSP TVVKGVKKPE
AAALARQMLA KVGLGDKYDS YPDQLSGGQQ QRVAIARALA MQPKVLLCDE ITSALDPELV
NEVLAVVKQL AAEGMTLIMV THEMRFARDV GDQLVFMHQG LIHESGPAKQ LFANPQTPEL
AGFIGAVH