Gene Daci_0197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0197 
Symbol 
ID5745733 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp224731 
End bp225636 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content71% 
IMG OID641295259 
Producthypothetical protein 
Protein accessionYP_001561228 
Protein GI160895646 
COG category[S] Function unknown 
COG ID[COG3777] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGCCA TGACAGACAA GCAAGCTACC GACACCCTCG ACGCCGCCGC GCTGGCGCAC 
CTTCAGTCCT GGCAGGGCCG CAGCGAAACC CTGGCAGACA GCATCACGGC CGCGCCCGTG
GCCGCGCTGT CGGCCACGCT GGACCGGGAA GACCCTGAGC CCGCCGACGG CACGGCGCTG
CCGCCGCTGT GGCACTGGAT GTACTTCCTG CCCCATGCAC GCCAAAGCGA GCTCGGCCCC
GACGGCCACC CGCGCCGTGG CGGCTTTCTG CCGCCCGTGC CGCTGCCGCG CCGCATGTGG
GCCGGCGGGC GCCTGCGCTG GGAGGCAGGC AACGCGCTGC AGGTGGGCCA GAAGGTGCAG
CGCCGCTCCA CCATCGGCTC GGTCAGCCAC AAGAGCGGCC GCTCGGGCGA GCTGCTGTTC
GTGCTGGTCG AGCATGCCTA CAGCAACGAC CAGGGCCTGG CGCTGACCGA GGAGCACGAC
ATCGTCTACC GCGCCGCTGC CCAGCCCGGC GATCCCGCGC CCACGCCCCA GAAGCCGCCG
CTGGACGGCC AGCAAACCTG GTCGCGCACC ATCGTTCCCG ACGACGTGCT GCTGTTCCGC
TACTCGGCCC TGACCTTCAA CGGCCACCGC ATCCACTACG ACCGCCGCTA CGTCACGGGC
GTGGAGGGCT ATCCGGGCCT GATCGTGCAC GGCCCGCTGA TCGCCACGCT GCTGCTGGAC
CTGCTGCGCC GCGAGCTGCC CCAGGCGCAG GTGCTGTCCT TCGAGTTCAA GGCCGTGCGC
CCCACCTTCG ACCTGCATGC CTTCAGCGTG CACGGCAAGC CTTCTGCGGA CGGCAAGACC
ATTGAACTCT GGGCCCAGGA CCACGAAGGC TGGCTGACCA TGACCGGAAA AGCCACCCTG
GCCTGA
 
Protein sequence
MAAMTDKQAT DTLDAAALAH LQSWQGRSET LADSITAAPV AALSATLDRE DPEPADGTAL 
PPLWHWMYFL PHARQSELGP DGHPRRGGFL PPVPLPRRMW AGGRLRWEAG NALQVGQKVQ
RRSTIGSVSH KSGRSGELLF VLVEHAYSND QGLALTEEHD IVYRAAAQPG DPAPTPQKPP
LDGQQTWSRT IVPDDVLLFR YSALTFNGHR IHYDRRYVTG VEGYPGLIVH GPLIATLLLD
LLRRELPQAQ VLSFEFKAVR PTFDLHAFSV HGKPSADGKT IELWAQDHEG WLTMTGKATL
A