Gene Daci_0180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0180 
Symbol 
ID5745716 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp204790 
End bp205143 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content75% 
IMG OID641295242 
ProductFmdB family regulatory protein 
Protein accessionYP_001561211 
Protein GI160895629 
COG category 
COG ID 
TIGRFAM ID[TIGR02605] putative regulatory protein, FmdB family 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACCT ACGACTATGA CTGCGTGCAA TGCGGCGGCT TCGAGGCCCT GCGGCCGCTG 
CGCCTGCGCG ACGAGCCCGC GGCCTGCCCC GGCTGCGGCA CGGCGTCCGC GCGCGTGCTG
GCCGCCGCGC CCCGGCTGGC GCTGATGGCC GACGGCACGC GCCGCGCCAT GGACACCAAC
GAGCGCGCGC GCCACGAGCC CGCCAGCTCG CGCGACTATG ACCATGGCTA TGCGCGCTTC
AAGCACCCGG CAGGCTGCGG CTGCTGCGGA TCGGGGCGGC GCAGCGCCAC GGTGACGGCA
CCCAACGGCG CAAAGTCCGC GCCCTCGCGG CGGCCCTGGA TGATCAGCCA CTAG
 
Protein sequence
MPTYDYDCVQ CGGFEALRPL RLRDEPAACP GCGTASARVL AAAPRLALMA DGTRRAMDTN 
ERARHEPASS RDYDHGYARF KHPAGCGCCG SGRRSATVTA PNGAKSAPSR RPWMISH