| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0171 |
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| Symbol | |
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| ID | 5745707 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 194297 |
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| End bp | 195295 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641295233 |
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| Product | porin |
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| Protein accession | YP_001561202 |
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| Protein GI | 160895620 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTGTA CCTCCCGCTT GACCCTTGCT TCTCTCGCCG TTGCGGCTGC CCTGCCGGTG
GCTGCCCAGT CATCTGCCAC AGGCTCCAAC GTCACCATCA GCGGTTATCT CGACGCTGGC
GTGTTCCGGG ATTTCGACAA GACCAGCAAG CTGGGCACGA TTCAGCGCAG CAACCTGGCG
ATTGCCGGTT TCGAGGACCT GGGCGGTGGC CTGAAGGCCA CCTTCCGGCT GAGCACGCGC
TTCGACCTGG ACACGGGCCT GACCGAGGAC TATCCGAAGA AGCCCTTCTG GCATGACGAG
TCCACCGTGG GCCTGCAGGG CAGCTGGGGC CATCTGCGCC TGGGCCGCGC GCTCAGCGCC
ATGTGGAGCC AGGAGTGGCA GTTCGACCCC TGGGGCAACT TCAACCGCAT CGCCTCGCCC
GCCTGGCACA TGGCCCACTA CCTGACGCCG ACCGACCGCG CCAGCAACAA CGGCTCGCCC
GAGTACGGCC GCATGTCCAA CGGCGTGTTC TACGATTCGC CCAAGTTCGG CGGCTTTTCG
CTGCACCTGA GCGCCTCGCC CGAGCGCACC GAGGCGCCGG GCCGCCAGGG CCGTGCGCGC
TCGGTGTCGG TCAACTACGA CCAGGGCGCA GTGGCGGCCA TGCTGGCGCA CGAGCGCAAC
GGCAGCGGCG ACACCGACCT GTACATGGGC GGCAAGTACC GCATCGGCAC GGCAGCGGTG
ATGCTGGCCT ATGACCGCAG CAAGTCGGGC ACGCCCGGCA CGGGGCCCGA CAAGTCGCGC
ATGGTCTCGC TGGGCGCCAC CTACGGCATC GGGGCGACCA CGCTCAAGGC CAGCTATGCA
CGCCAGCGGC TGGACCGCGA TACCAACAAC ATGCTGTCGC TGGGCGCCGA GTACGCGCTG
TCCAAGCGCA CCATGCTCTA CACCAGCCTG GGACACCAGC GCTACGAGAA CCAGAGCTCG
CGCACGGCCT TCGGCGTGGG CATGGCCCAT TCCTTCTGA
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| Protein sequence | MRCTSRLTLA SLAVAAALPV AAQSSATGSN VTISGYLDAG VFRDFDKTSK LGTIQRSNLA
IAGFEDLGGG LKATFRLSTR FDLDTGLTED YPKKPFWHDE STVGLQGSWG HLRLGRALSA
MWSQEWQFDP WGNFNRIASP AWHMAHYLTP TDRASNNGSP EYGRMSNGVF YDSPKFGGFS
LHLSASPERT EAPGRQGRAR SVSVNYDQGA VAAMLAHERN GSGDTDLYMG GKYRIGTAAV
MLAYDRSKSG TPGTGPDKSR MVSLGATYGI GATTLKASYA RQRLDRDTNN MLSLGAEYAL
SKRTMLYTSL GHQRYENQSS RTAFGVGMAH SF
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