Gene Daci_0166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0166 
Symbol 
ID5745702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp188179 
End bp189336 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content72% 
IMG OID641295228 
ProductFAD dependent oxidoreductase 
Protein accessionYP_001561197 
Protein GI160895615 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGAAA GCCAGGTTCT GGATTTCGCC GTGATCGGTG CCGGCATGGC CGGCGCCTCC 
GTGGCCTGGC GGCTGGCCGG GGGTGGCGCC TCGGTGCTGG TGCTGGAACG CGAGCCGCAG
CCCGGATACC ACGCCACGGG CCGCTCGGCC GCCATGTTCA TGGAGAGCTA CGGCACTGCG
CAGATACGCG CGCTGACACG CGCCAGCCGT GGCTTCTACA GCGCGCCTCC GGAAGGTTTT
TGCGAACACG CGCTGCTGCA GCCGCGCAGC GTGCTCTACA TAGGGACGGC CGGCCAGGAA
CCCCAGCTGG ACGAGGCCCT GGCCATGTAC CGCCGCGACG GCCTGCGCGC CGAGCGCATC
GACGCGCGCC AGGCCTGCGC CCTGGTGCCC TGCCTGCAGG AGAGCCTGCT CGTGGGCGCC
GTGCATGACC TGGACGCCAT GGACATCGAC GTGGCCGAAC TGCACCAGGG CTTTCTGCGC
GGCATGGCGC GTGCCGGTGC GCGGCTGCGC TGCGGCGCCG AACTGTCGGG CGCCGAGCGT
GAGGTGGATG GTGATGGCCA GGGCCTGTGG ACCCTGGTGC TGCAGGACGG GTCACAGGTC
CGCGCCCGCG CCGTGGTCAA TGCCGCAGGC GCCTGGGCCG ATGCCGTGGC CCGGCTGTGC
GGCGCGCGGC CGCTGGGCAT CGAGCCCCGG CGCCGCTCGG CCTTCACCTT TGCCGCGCCC
GAGGGCGAGG ACATCCACGG CTGGCCTGCC GTGATCGGCG TGGACGAGAG CTTCTACTTC
AAGCCCGATG CGGGCCAGCT GCTGGGCTCG CCCGCCAATG CCGATCCCGT GCCGCCGCAC
GACGTGGTGG CCGAGGAACT GGACGTGGCC ATGGGCATAG ACCGCATCGA GACACTGACC
CGCCTGCGCA TACGCCGGCC GCGCCATGTC TGGGCCGGGC TGCGCAGCTT TGCGCCCGAC
GACGACTTCG TGATCGGCTG GGATGCGCAG CGCGAGGGAT TTTTCTGGCT GGCCGGGCAG
GGCGGCTACG GCATACAGAC GGCGGCCGGC GCCTCGGCCG CCGCGGCCGC ACTGCTGATG
CGCGAGCCGC TGCCCGCCGA GCTGCTGGCG CAGGGCGTCG ATGCCCTGCG GCTGAGTCCG
GCGCGCTTCG CGGCCTGA
 
Protein sequence
MMESQVLDFA VIGAGMAGAS VAWRLAGGGA SVLVLEREPQ PGYHATGRSA AMFMESYGTA 
QIRALTRASR GFYSAPPEGF CEHALLQPRS VLYIGTAGQE PQLDEALAMY RRDGLRAERI
DARQACALVP CLQESLLVGA VHDLDAMDID VAELHQGFLR GMARAGARLR CGAELSGAER
EVDGDGQGLW TLVLQDGSQV RARAVVNAAG AWADAVARLC GARPLGIEPR RRSAFTFAAP
EGEDIHGWPA VIGVDESFYF KPDAGQLLGS PANADPVPPH DVVAEELDVA MGIDRIETLT
RLRIRRPRHV WAGLRSFAPD DDFVIGWDAQ REGFFWLAGQ GGYGIQTAAG ASAAAAALLM
REPLPAELLA QGVDALRLSP ARFAA