Gene Daci_0139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0139 
Symbol 
ID5745675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp151691 
End bp152179 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content66% 
IMG OID641295201 
Producthypothetical protein 
Protein accessionYP_001561170 
Protein GI160895588 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0820746 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.13795 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAGT TTTCTCTGTC CCACCGCATG CTGGCCGCTG CCGGCCTGGC GGCCCTGCTC 
ACCGCCTGCG CATCGCCCAC GGCACCGTCC GCCAGCGGCC CGGCCCAGCC TGCGGGCGGG
CATGGCCAGT CTGCCTTCAT GGGCAGCTAC GACGCCAACC GTGATGGCGT GGTCACGCGC
CAGGAGTACG ACACCGTGCG CAAGCAGCGC TTCCTGGCCG GCGACACCAA TGGCGACGGC
TGGCTCAGCG AGAAGGAGTA CGTGGACGAG TTCGAGGCCC GCCTCAAGCA GCAATACGCG
GGCCGCCAGC CCGACGAGCG CTATGCCCAG TCCATGAAGC AGGCCCATGT GCGCTTCGGC
ATCGTGGACA GGAACCGCGA CGGCAAATAC ACCGTGGAAG AAGACATGGC CATCGCCGAA
CGCAGCTTCA AGGAAGCCGA CGTCAATGCC GATGGCGTCG TGGACAAGAA CGACGTCAAG
AAGCCCTGA
 
Protein sequence
MIEFSLSHRM LAAAGLAALL TACASPTAPS ASGPAQPAGG HGQSAFMGSY DANRDGVVTR 
QEYDTVRKQR FLAGDTNGDG WLSEKEYVDE FEARLKQQYA GRQPDERYAQ SMKQAHVRFG
IVDRNRDGKY TVEEDMAIAE RSFKEADVNA DGVVDKNDVK KP