| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0137 |
|---|
| Symbol | |
|---|
| ID | 5745673 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 147435 |
|---|
| End bp | 149063 |
|---|
| Gene Length | 1629 bp |
|---|
| Protein Length | 542 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641295199 |
|---|
| Product | aminotransferase class-III |
|---|
| Protein accession | YP_001561168 |
|---|
| Protein GI | 160895586 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.174572 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCTGGCTA GCTGCCGACC TGTCCGCGGA GTGCTCTTGC GAGACCATTG CTCCCCCGTG
TGTGATTGTT CCTGCTGGCT TTCCGTGATT CTCCCATCAA TTGATAATGA TTATCATTTG
TTTTGTCTCA TTTACGTCAC AGGGGCCGAT CCAGGCTCCG CGCGGGCCTC CTCCACAAAC
CCCACACAAA GACTCGACAG CGCAGCAAGA TTGCCCGCTC ACACTGCGGC GGCTGAATAT
CTGGAGCCCT TTGCTGTGAT CAATAACGCC CAACTTCTGG CCGACGAAGC CAAGTACTGC
TCGTTCGGGG ATACCGTCCA CTACGTCAAC CCGCCCAAGA TTTTCTCGGG CTGCGAAGGC
AGCTACATGT ACGACGAGGC CGGCACGCCC TACCTTGATC TGCAGATGTG GTATTCGGCC
GTGAACTTCG GCTACAAGAA CAAGCGCCTC GAGCAGAAGA TGATCGAGCA GCTGCAGACC
CTGCCCCAGG TCGCCAGCCA GTACCTGCAC CCCACCAAGA TCGAGCTGGC CAAGTTCATC
GCCCAGGATG CGGAGCGCAA GTGGGGCCAT GCCGGCCGCG TGCACTTCAA CGTGGGCGGC
GCCCAGGCCA TCGAGGACTC GCTCAAGGTC GTGCGCAATG CCAGCGGCGG CAAGAGCCTG
ATGTTCGCCT TCGAGGGCGG CTACCACGGC CGCACGCTGG GCGCCTCCAG CATCACCTCC
AGCTACCGCT ACCGCCGCCG CTACGGCCAC TTCGGCGACC GCGCGCAGTT CATCCCCTTC
CCCTACCCGT TCCGCCGCCC CAAGGGCATG ACGTCCGAGG AGTACGCGGA CTCCATCGTC
CGGGAATTCG CGCGCAAGTT CGAGAACGAG TACCACGCCA TCTGGGACCC CAAGACCAAC
CAGTGCGAGT ACGCGGCCTT CTACGTGGAG CCCATCCAGG GCACGGGCGG CTACGTCGTG
CCGCCGCCCA ACTTCTTCAA GGGCCTCAAG AAGGTGCTGG ACGACCACGG CGTGCTGATG
GTGGTCGATG AAATCCAGAT GGGCTTCTGG CGCACCGGCA CGCTGTGGTC GGTGGAGAAC
TTCGGCGTCA AGCCCGACGT GCTGGTCTTC GCCAAGGCGC TGACCAACGG CCTCAACGCC
CTGTCGGGCC TGTGGGCGCG CGAGGAGCTG ATCAACCCCA CCATCTTCCC GCCGGGATCG
ACGCACTCCA CCTTCGCCTC CAACCCGCTG GGCACGGCCC TGGGCCTGGA AGTCATGAAG
ATGACCCACG AGATGGACTT CGGCCGCCAG GTGCGCGAAT CGGGCGCCTA CTTCCTCGAA
GGCCTCAAGG AGCTGCAAAA GCGCCACAAG GAAATCGGCG ACGTGGACGG CCTGGGCCTG
GCGCTGCGCG CCGAGATCTG CACCGAAGAC GGCTTCACGC CCAACAAGGC GCTGCTGGAC
AAGATGGTGG ACATCGGCCT CGAAGGCGGC CTGGAATACC AGGGCCAGAA ACGCGGCCTG
GTGCTGGACG TGGGCGGCTA CTACAAGAAC GTGATCACCT TCGCGCCCTC GCTGATGATC
TCGCGCCCCG AGATCGACGA AGCCATGGTC CTGCTGGACC AGTTGCTCAC GAAAGCCAAG
GCGGCCTGA
|
|---|
| Protein sequence | MLASCRPVRG VLLRDHCSPV CDCSCWLSVI LPSIDNDYHL FCLIYVTGAD PGSARASSTN
PTQRLDSAAR LPAHTAAAEY LEPFAVINNA QLLADEAKYC SFGDTVHYVN PPKIFSGCEG
SYMYDEAGTP YLDLQMWYSA VNFGYKNKRL EQKMIEQLQT LPQVASQYLH PTKIELAKFI
AQDAERKWGH AGRVHFNVGG AQAIEDSLKV VRNASGGKSL MFAFEGGYHG RTLGASSITS
SYRYRRRYGH FGDRAQFIPF PYPFRRPKGM TSEEYADSIV REFARKFENE YHAIWDPKTN
QCEYAAFYVE PIQGTGGYVV PPPNFFKGLK KVLDDHGVLM VVDEIQMGFW RTGTLWSVEN
FGVKPDVLVF AKALTNGLNA LSGLWAREEL INPTIFPPGS THSTFASNPL GTALGLEVMK
MTHEMDFGRQ VRESGAYFLE GLKELQKRHK EIGDVDGLGL ALRAEICTED GFTPNKALLD
KMVDIGLEGG LEYQGQKRGL VLDVGGYYKN VITFAPSLMI SRPEIDEAMV LLDQLLTKAK
AA
|
|---|
| |