| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0124 |
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| Symbol | |
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| ID | 5745660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 134540 |
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| End bp | 135544 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641295186 |
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| Product | fimbrial protein |
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| Protein accession | YP_001561155 |
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| Protein GI | 160895573 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3539] P pilus assembly protein, pilin FimA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTTCA CAGCCATCTT GCGCCATGGA TTGGCCACGC CTCTCCTCTT GATGTTCTGT
ATGGCCCCTA TTTCATCCTG GGCCCGTTGT TCCTCCCAGG GCTGGAATGC CCAGTTTCCG
GGTTCAGCCA ACACCCCCAC CATCGTCAAT GAAAATTATC CGATTGGCAG CGTTGTCTAT
TCCAGGACAA TGGCTTTGCA AAATACCGGG GCCGGCAGCT ACCACATTTC TTGCGACAAT
GATTTTTATT ACATAGAAGG CATTGGAACG GAAAGCGGTG GAATATATTC CACCGCCATC
CCCAGTCTGG GCATGAGAAT CACGTGGGAA AGAGCCGCGC CTTATTCAGG GTCCATGCTG
AAACAGGGCA TATTCCATTC ACTGCCAAGC AACAACATGA CCATCGAGCT CGTGAAAACC
GGGGAACTCA CATCTGGCGG TTCCCTGAAT GGCAGCTTCG CACGAATCTA CTCAGGGACC
AGCAATGCCC GTGACTTGCT GGCCACGGTA TTCTTTTCAA GTGGCATCAC CGTCAACGTC
AGCAGCCGCC CCAGGCCGCC GACCTGCCGG GTGTCCACGG GCAAGATCGA CGTGACCATG
GCCCCCGCCC CGTTCGCCGA TTTCAAGGGA ATCGGGTCCG TCACGGCAGC CAAGGACTTC
AGCATCGAGT TGACCTGCGC GGGAGGCGAA GCCAATACAC GCCTGACCGC CTTCATCACG
CTGACGGATG CCACCCAGGC CACCAATCGA TCGAGCACGC TGACGCTGGC GCAAAATTCC
AAGGCCCGGG GTGTCGGCAT ACAGGTACTG AGAAACAACG TGCCCGTGAG CTTCGGCCCC
GACTCCGGCA GCCTGGGCAA TGCCAACCAA TGGAATGCGG GCCAGGTCGC ACAGGGGCAG
AACAGCCTGA AGATTCCGCT GAGCGCGCGC CTGGTGCAGA CGGCCGGCAG CGTGACACCT
GGCATGGCCT ATGGCCGGGC GACCTTCACG ATGAGCTACC AATAG
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| Protein sequence | MSFTAILRHG LATPLLLMFC MAPISSWARC SSQGWNAQFP GSANTPTIVN ENYPIGSVVY
SRTMALQNTG AGSYHISCDN DFYYIEGIGT ESGGIYSTAI PSLGMRITWE RAAPYSGSML
KQGIFHSLPS NNMTIELVKT GELTSGGSLN GSFARIYSGT SNARDLLATV FFSSGITVNV
SSRPRPPTCR VSTGKIDVTM APAPFADFKG IGSVTAAKDF SIELTCAGGE ANTRLTAFIT
LTDATQATNR SSTLTLAQNS KARGVGIQVL RNNVPVSFGP DSGSLGNANQ WNAGQVAQGQ
NSLKIPLSAR LVQTAGSVTP GMAYGRATFT MSYQ
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